Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j22
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.48 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   0.48 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              24   1.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.5  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   1.5  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   5.9  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 516 CRH-CRPNPGVTTTSPVRALMCPE 448
           C H C P P + + SP+ +  CP+
Sbjct: 43  CSHLCLPAPRINSKSPLLSCACPD 66


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 516 CRH-CRPNPGVTTTSPVRALMCPE 448
           C H C P P + + SP+ +  CP+
Sbjct: 43  CSHLCLPAPRINSKSPLLSCACPD 66


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 72  ITALCVCVWFIVIKKFNI 125
           I+A+CVCV  + +++F I
Sbjct: 7   ISAICVCVGALTLEEFQI 24


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 522 MTCRHCRPNPGVTTTS 475
           +TC +C PNP   TT+
Sbjct: 425 VTCTNCGPNPCTHTTT 440


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 522 MTCRHCRPNPGVTTTS 475
           +TC +C PNP   TT+
Sbjct: 411 VTCTNCGPNPCTHTTT 426


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 522 MTCRHCRPNPGVTTTS 475
           +TC +C PNP   TT+
Sbjct: 445 VTCTNCGPNPCTHTTT 460



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 166 CGMRAPGECWSVPRWSQTVAPPPAD-YSN 249
           CGMR PG+   +   S T +  P + Y N
Sbjct: 89  CGMRWPGDATGLSNRSSTSSNDPKNQYKN 117


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 522 MTCRHCRPNPGVTTTS 475
           +TC +C PNP   TT+
Sbjct: 394 VTCTNCGPNPCTHTTT 409


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 72  ITALCVCVWFIVIKKFNIKYQPGE 143
           I+A+C+CV  + IK F    + G+
Sbjct: 7   ISAICICVGALSIKDFQNAIRMGQ 30


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 72  ITALCVCVWFIVIKKFNI 125
           I+A+CVCV  + +++  I
Sbjct: 7   ISAICVCVGALTLEELQI 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,807
Number of Sequences: 438
Number of extensions: 2700
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)