Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j21
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        25   2.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.3  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.3  

>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +3

Query: 246 RLAPCLQLPLENKTLVNVIEKAKDWALMHGVGMRDKK--HFNKDVIQIAPFILLPSPFPK 419
           RL+  L +P +   LV VI K   + +       D+    F+ D +++          PK
Sbjct: 278 RLSMLLIMPRKGVPLVEVIRKLAAYGIDRVFDELDRSLVDFDDDEVEVH--------LPK 329

Query: 420 TEFMKAVELQPVLNELMHKVAHD 488
            EF     L P+LN++  + A D
Sbjct: 330 FEFNSDYNLIPILNQMGIREAFD 352


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 438  VELQPVLNELMHKVAHDDEFLEQTLQNALQVDEFTANLYDIWLKVK 575
            +EL  +L   +H+ A     L++      ++ E +  L  IW  V+
Sbjct: 1102 LELDTMLANHLHREAFSSSELQKAKDRLAKLQELSGGLNTIWKGVR 1147


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 60  FYFELHDSFVSVNANNKQKF 1
           FY+ +HD F  V +N++ K+
Sbjct: 280 FYWCVHDLFAKVQSNSQFKY 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,045
Number of Sequences: 2352
Number of extensions: 9972
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)