Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j20
(564 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 151 2e-36
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 151 2e-36
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 133 4e-31
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 132 6e-31
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 132 6e-31
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 107 3e-23
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 59 1e-08
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 59 1e-08
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 59 1e-08
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 59 1e-08
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 59 1e-08
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 57 5e-08
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 57 5e-08
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 57 5e-08
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 57 5e-08
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 57 5e-08
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 56 9e-08
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 55 2e-07
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 55 2e-07
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 55 2e-07
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 55 2e-07
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 54 3e-07
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 54 3e-07
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 54 3e-07
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 54 3e-07
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 54 3e-07
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 54 3e-07
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 54 3e-07
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 54 3e-07
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 54 3e-07
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 54 3e-07
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 54 5e-07
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 54 5e-07
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 54 5e-07
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 54 5e-07
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 54 5e-07
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 54 5e-07
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 53 6e-07
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 53 6e-07
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 53 6e-07
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 53 6e-07
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 52 2e-06
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 52 2e-06
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 52 2e-06
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 50 7e-06
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 50 7e-06
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 49 1e-05
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 48 2e-05
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 48 2e-05
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 48 2e-05
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 46 1e-04
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 45 2e-04
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 45 2e-04
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 45 2e-04
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 44 3e-04
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 44 4e-04
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 44 4e-04
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 43 9e-04
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 43 9e-04
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 43 9e-04
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 43 9e-04
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 43 9e-04
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 43 9e-04
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 43 9e-04
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 43 9e-04
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 42 0.001
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 42 0.001
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 42 0.001
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 42 0.001
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 42 0.001
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 42 0.001
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 42 0.001
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 42 0.001
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 42 0.001
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 42 0.001
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 42 0.001
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 42 0.001
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 42 0.001
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 42 0.001
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 42 0.001
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 42 0.002
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 42 0.002
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 42 0.002
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 42 0.002
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 42 0.002
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 42 0.002
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 41 0.003
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 41 0.003
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 41 0.003
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 40 0.005
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 40 0.005
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 40 0.005
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 40 0.006
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 40 0.006
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 40 0.006
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 40 0.006
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 40 0.006
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 40 0.006
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 40 0.006
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 40 0.006
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 40 0.006
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 40 0.006
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 40 0.006
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.006
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 39 0.011
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 39 0.014
BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif prote... 38 0.018
BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif prote... 38 0.018
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 38 0.018
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 38 0.018
AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif prote... 38 0.018
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 38 0.024
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 38 0.024
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 38 0.024
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 38 0.024
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 38 0.024
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 38 0.024
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 38 0.024
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 38 0.024
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 37 0.043
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 37 0.043
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 37 0.043
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 37 0.043
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 37 0.043
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 37 0.043
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 37 0.043
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 37 0.043
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 37 0.043
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 37 0.043
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 37 0.043
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 37 0.043
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 37 0.043
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 37 0.043
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 37 0.043
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 37 0.043
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 37 0.056
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 37 0.056
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 37 0.056
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 37 0.056
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 37 0.056
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 37 0.056
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 37 0.056
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 37 0.056
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 37 0.056
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 37 0.056
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 37 0.056
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 37 0.056
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 37 0.056
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 36 0.074
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 36 0.074
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 36 0.074
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 36 0.074
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 36 0.074
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 36 0.074
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 36 0.098
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 36 0.098
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 36 0.098
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 36 0.13
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 36 0.13
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 36 0.13
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.13
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 36 0.13
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 36 0.13
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 36 0.13
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 36 0.13
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 35 0.17
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 35 0.17
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 35 0.17
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 35 0.17
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.17
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.17
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.17
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 35 0.17
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.17
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.17
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 35 0.17
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 35 0.23
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 35 0.23
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 35 0.23
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 35 0.23
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 35 0.23
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.30
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.30
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 34 0.30
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.30
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein. 34 0.30
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.30
AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isofo... 34 0.30
AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isofo... 34 0.30
U21663-1|AAB02393.1| 366|Homo sapiens DAZ protein protein. 34 0.40
BC114927-1|AAI14928.1| 613|Homo sapiens DAZ1 protein protein. 34 0.40
BC113006-1|AAI13007.1| 534|Homo sapiens deleted in azoospermia ... 34 0.40
BC113005-1|AAI13006.1| 438|Homo sapiens deleted in azoospermia ... 34 0.40
BC047617-1|AAH47617.1| 390|Homo sapiens deleted in azoospermia ... 34 0.40
BC047480-1|AAH47480.1| 390|Homo sapiens deleted in azoospermia ... 34 0.40
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 34 0.40
AF414184-1|AAL24502.1| 534|Homo sapiens deleted in azoospermia ... 34 0.40
AF271088-1|AAF91406.1| 501|Homo sapiens deleted in azoospermia ... 34 0.40
AF271087-1|AAF91405.1| 458|Homo sapiens deleted in azoospermia ... 34 0.40
AF248483-1|AAF91332.1| 413|Homo sapiens deleted in azoospermia ... 34 0.40
AF248482-1|AAF91331.1| 331|Homo sapiens deleted in azoospermia ... 34 0.40
AF248481-1|AAF91330.1| 486|Homo sapiens deleted in azoospermia ... 34 0.40
AF248480-1|AAF91329.1| 558|Homo sapiens deleted in azoospermia ... 34 0.40
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 33 0.52
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 33 0.52
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.52
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 33 0.52
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.52
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 33 0.52
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 33 0.52
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 33 0.52
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 33 0.52
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 33 0.52
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 33 0.52
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 33 0.52
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 33 0.52
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 33 0.52
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 33 0.52
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 33 0.52
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 33 0.52
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 33 0.69
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 33 0.69
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 33 0.69
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 33 0.69
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 0.69
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 33 0.69
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 33 0.69
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 33 0.69
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 0.69
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 0.69
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 33 0.69
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 33 0.69
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 33 0.69
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 0.69
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 33 0.92
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 33 0.92
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 33 0.92
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 32 1.2
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 1.2
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 32 1.2
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 32 1.2
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 32 1.2
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 32 1.2
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 32 1.2
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 32 1.2
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 32 1.2
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 32 1.2
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 32 1.2
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 32 1.2
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 32 1.2
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 32 1.2
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 32 1.2
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 32 1.2
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 32 1.2
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 32 1.2
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 1.2
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 32 1.2
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 32 1.2
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 32 1.2
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 32 1.2
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 32 1.2
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 1.2
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 32 1.2
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 32 1.2
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 32 1.2
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 32 1.2
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 32 1.2
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 32 1.2
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 32 1.2
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.6
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 32 1.6
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 32 1.6
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.6
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.6
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.6
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.6
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.6
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 32 1.6
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 32 1.6
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 32 1.6
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 32 1.6
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 32 1.6
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 32 1.6
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 31 2.1
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 31 2.1
U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA bin... 31 2.1
U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein. 31 2.1
U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein. 31 2.1
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 31 2.1
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 31 2.1
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 31 2.1
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 2.1
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 31 2.1
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 31 2.1
BC027595-1|AAH27595.1| 295|Homo sapiens deleted in azoospermia-... 31 2.1
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 31 2.1
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 31 2.1
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 2.1
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 31 2.1
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 31 2.1
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 31 2.1
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 31 2.1
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 31 2.1
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 31 2.1
AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator... 31 2.1
AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-... 31 2.1
AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-... 31 2.1
AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-... 31 2.1
AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein. 31 2.1
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 31 2.1
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 31 2.8
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 31 2.8
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 2.8
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.8
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 31 2.8
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 31 2.8
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.8
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 31 2.8
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 31 2.8
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 2.8
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 31 3.7
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 3.7
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 31 3.7
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 31 3.7
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 31 3.7
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 3.7
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 31 3.7
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 3.7
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 31 3.7
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 31 3.7
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 3.7
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 31 3.7
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 30 4.9
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 30 4.9
EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein. 30 4.9
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 30 4.9
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 30 4.9
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 30 4.9
BC056876-1|AAH56876.2| 559|Homo sapiens chromosome 13 open read... 30 4.9
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 30 4.9
BC025367-1|AAH25367.2| 559|Homo sapiens chromosome 13 open read... 30 4.9
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 30 4.9
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 30 4.9
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 30 4.9
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 30 4.9
AL138695-5|CAH72712.2| 559|Homo sapiens chromosome 13 open read... 30 4.9
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 30 4.9
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 30 4.9
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 30 4.9
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 30 4.9
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 30 4.9
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 30 4.9
BC036917-1|AAH36917.1| 237|Homo sapiens C6orf141 protein protein. 30 6.5
AK054918-1|BAB70828.1| 244|Homo sapiens protein ( Homo sapiens ... 30 6.5
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 29 8.5
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 29 8.5
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 29 8.5
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 29 8.5
BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein pr... 29 8.5
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 29 8.5
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 29 8.5
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 29 8.5
BC037329-1|AAH37329.1| 462|Homo sapiens TANC1 protein protein. 29 8.5
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 29 8.5
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 29 8.5
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 29 8.5
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 29 8.5
BC006986-1|AAH06986.1| 413|Homo sapiens RNA binding motif prote... 29 8.5
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 29 8.5
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 29 8.5
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 29 8.5
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 29 8.5
AL390039-3|CAI41564.1| 413|Homo sapiens novel protein protein. 29 8.5
AL390039-2|CAC19636.1| 405|Homo sapiens novel protein protein. 29 8.5
AK001878-1|BAA91957.1| 405|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 29 8.5
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 29 8.5
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 29 8.5
AB051515-1|BAB21819.1| 1644|Homo sapiens KIAA1728 protein protein. 29 8.5
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 151 bits (366), Expect = 2e-36
Identities = 73/130 (56%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCHXXX 353
M D+ P+TLYVGNL VTEV + LF QIG K CK+I E NDPY F+EF H
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 533
MN R +L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++ AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 534 GEISNCRIVR 563
G+IS+ R+V+
Sbjct: 121 GKISDARVVK 130
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXX 353
D S+ ++VG+L P +T + + F G + +++++ Y F+ F
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHH-----------------IFVGD 482
M + + ++++ NWAT PK+ N+ ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 483 LSPEIETNILREAFAPFGEISNCRI 557
++ + ++R+ F+PFG+I R+
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRV 236
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 151 bits (366), Expect = 2e-36
Identities = 73/130 (56%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCHXXX 353
M D+ P+TLYVGNL VTEV + LF QIG K CK+I E NDPY F+EF H
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 533
MN R +L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++ AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 534 GEISNCRIVR 563
G+IS+ R+V+
Sbjct: 121 GKISDARVVK 130
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXX 353
D S+ ++VG+L P +T + + F G + +++++ Y F+ F
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHH-----------------IFVGD 482
M + + ++++ NWAT PK+ N+ ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 483 LSPEIETNILREAFAPFGEISNCRI 557
++ + ++R+ F+PFG+I R+
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRV 236
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 133 bits (322), Expect = 4e-31
Identities = 71/142 (50%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Frame = +3
Query: 171 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDPYAFLEFTCHX 347
A M DE PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 37 AAMEDEM-PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHR 95
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTS----------NHHHIFVGDLSPEI 497
MN R ++ KE+KVNWAT+P +Q K +S +H H+FVGDLSPEI
Sbjct: 96 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 155
Query: 498 ETNILREAFAPFGEISNCRIVR 563
T ++ AFAPFG IS+ R+V+
Sbjct: 156 TTEDIKAAFAPFGRISDARVVK 177
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 132 bits (320), Expect = 6e-31
Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDPYAFLEFTCHXXXXX 359
++ PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 360 XXXXMNKRVVLDKEMKVNWATSPGNQPKTDTS----------NHHHIFVGDLSPEIETNI 509
MN R ++ KE+KVNWAT+P +Q K +S +H H+FVGDLSPEI T
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 510 LREAFAPFGEISNCRIVR 563
++ AFAPFG IS+ R+V+
Sbjct: 122 IKAAFAPFGRISDARVVK 139
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 132 bits (320), Expect = 6e-31
Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDPYAFLEFTCHXXXXX 359
++ PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 360 XXXXMNKRVVLDKEMKVNWATSPGNQPKTDTS----------NHHHIFVGDLSPEIETNI 509
MN R ++ KE+KVNWAT+P +Q K +S +H H+FVGDLSPEI T
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 510 LREAFAPFGEISNCRIVR 563
++ AFAPFG IS+ R+V+
Sbjct: 122 IKAAFAPFGRISDARVVK 139
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 107 bits (257), Expect = 3e-23
Identities = 50/91 (54%), Positives = 62/91 (68%)
Frame = +3
Query: 291 IIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHI 470
I NDPY F+EF H MN R +L KE+KVNWAT+P +Q K DTSNH H+
Sbjct: 2 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKK-DTSNHFHV 60
Query: 471 FVGDLSPEIETNILREAFAPFGEISNCRIVR 563
FVGDLSPEI T ++ AFAPFG+IS+ R+V+
Sbjct: 61 FVGDLSPEITTEDIKSAFAPFGKISDARVVK 91
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXX 353
D S+ ++VG+L P +T + + F G + +++++ Y F+ F
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHH-----------------IFVGD 482
M + + ++++ NWAT PK+ N+ ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 483 LSPEIETNILREAFAPFGEISNCRI 557
++ + ++R+ F+PFG+I R+
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRV 197
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 58.8 bits (136), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IFV +L I L +
Sbjct: 62 TKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
+ FG I +C +V
Sbjct: 119 VSAFGNILSCNVV 131
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
P T + ++VGDL P++ +L E F+P G I + RI R
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR 44
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 58.8 bits (136), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IFV +L I L +
Sbjct: 62 TKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
+ FG I +C +V
Sbjct: 119 VSAFGNILSCNVV 131
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
P T + ++VGDL P++ +L E F+P G I + RI R
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR 44
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 58.8 bits (136), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IFV +L I L +
Sbjct: 62 TKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
+ FG I +C +V
Sbjct: 119 VSAFGNILSCNVV 131
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
P T + ++VGDL P++ +L E F+P G I + RI R
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR 44
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 58.8 bits (136), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IFV +L I L +
Sbjct: 62 TKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
+ FG I +C +V
Sbjct: 119 VSAFGNILSCNVV 131
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
P T + ++VGDL P++ +L E F+P G I + RI R
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR 44
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 58.8 bits (136), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IFV +L I L +
Sbjct: 62 TKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
+ FG I +C +V
Sbjct: 119 VSAFGNILSCNVV 131
Score = 33.9 bits (74), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
P T + ++VGDL P++ +L E F+P G I + RI R
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR 44
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 56.8 bits (131), Expect = 5e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + ++ R+ + YA++ F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 293 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 352
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 353 RIVATKPLYV 362
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 56.8 bits (131), Expect = 5e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + ++ R+ + YA++ F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 56.8 bits (131), Expect = 5e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + ++ R+ + YA++ F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 56.8 bits (131), Expect = 5e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + ++ R+ + YA++ F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 56.8 bits (131), Expect = 5e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L P VTE L F G + ++ R+ + YA++ F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVATKPLYV 365
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 56.0 bits (129), Expect = 9e-08
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ +L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKVLYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP--YAFLEFTCHXXXXXXXXXM 374
LYVG+LDP VTE L F G ++ +I R+P P Y ++ F M
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C+
Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSCK 136
Query: 555 IV 560
+V
Sbjct: 137 VV 138
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 138 DVKKVIDRLR*ANMGDESHPK--TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
++++ +RLR + ++S P +Y+ NLD ++ + L F G + K++ E G
Sbjct: 283 ELRRRFERLR---LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQ 339
Query: 312 DP-YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKV 410
+ + F+ MN R+V K + V
Sbjct: 340 GKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ ++L + F P G + RI R
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICR 51
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP--YAFLEFTCHXXXXXXXXXM 374
LYVG+LDP VTE L F G ++ +I R+P P Y ++ F M
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C+
Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSCK 136
Query: 555 IV 560
+V
Sbjct: 137 VV 138
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 138 DVKKVIDRLR*ANMGDESHPK--TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
++++ +RLR + ++S P +Y+ NLD ++ + L F G + K++ E G
Sbjct: 283 ELRRRFERLR---LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQ 339
Query: 312 DP-YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKV 410
+ + F+ MN R+V K + V
Sbjct: 340 GKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ ++L + F P G + RI R
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICR 51
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP--YAFLEFTCHXXXXXXXXXM 374
LYVG+LDP VTE L F G ++ +I R+P P Y ++ F M
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 64
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C+
Sbjct: 65 NFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSCK 121
Query: 555 IV 560
+V
Sbjct: 122 VV 123
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 138 DVKKVIDRLR*ANMGDESHPK--TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
++++ +RLR + ++S P +Y+ NLD ++ + L F G + K++ E G
Sbjct: 268 ELRRRFERLR---LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQ 324
Query: 312 DP-YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKV 410
+ + F+ MN R+V K + V
Sbjct: 325 GKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 358
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ ++L + F P G + RI R
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICR 36
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP--YAFLEFTCHXXXXXXXXXM 374
LYVG+LDP VTE L F G ++ +I R+P P Y ++ F M
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C+
Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSCK 136
Query: 555 IV 560
+V
Sbjct: 137 VV 138
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 138 DVKKVIDRLR*ANMGDESHPK--TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
++++ +RLR + ++S P +Y+ NLD ++ + L F G + K++ E G
Sbjct: 283 ELRRRFERLR---LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQ 339
Query: 312 DP-YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKV 410
+ + F+ MN R+V K + V
Sbjct: 340 GKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ ++L + F P G + RI R
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICR 51
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCRIV 560
F+ FG I +C++V
Sbjct: 119 FSAFGNILSCKVV 131
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LY+ NLD ++ + L F G + K++ E G + F+ F+ MN
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGSKPLYV 365
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 53.6 bits (123), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 53.2 bits (122), Expect = 6e-07
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 174 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTC 341
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN ++ + +++ W+ K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDT 118
Query: 522 FAPFGEISNCRI 557
F+ FG I +C++
Sbjct: 119 FSTFGNILSCKV 130
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 53.2 bits (122), Expect = 6e-07
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 174 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTC 341
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN ++ + +++ W+ K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDT 118
Query: 522 FAPFGEISNCRI 557
F+ FG I +C++
Sbjct: 119 FSTFGNILSCKV 130
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD S+ + L F G + K++ E G+ + F+ F+ MN
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGTKPLYV 365
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 53.2 bits (122), Expect = 6e-07
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 174 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTC 341
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN ++ + +++ W+ K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDT 118
Query: 522 FAPFGEISNCRI 557
F+ FG I +C++
Sbjct: 119 FSTFGNILSCKV 130
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 53.2 bits (122), Expect = 6e-07
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 174 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTC 341
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN ++ + +++ W+ K+ N IF+ +L I+ L +
Sbjct: 62 PADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDT 118
Query: 522 FAPFGEISNCRI 557
F+ FG I +C++
Sbjct: 119 FSTFGNILSCKV 130
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL P++ +L E F+P G I + R+ R
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCR 44
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD S+ + L F G + K++ E G+ + F+ F+ MN
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 356 RIVGTKPLYV 365
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCR 554
F+ FG I +C+
Sbjct: 119 FSAFGNILSCK 129
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +3
Query: 174 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 341
N S+P +LYVG+L VTE L F G V ++ R+ + YA++ F
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
MN V+ K +++ W+ + K+ N +F+ +L I+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDT 118
Query: 522 FAPFGEISNCR 554
F+ FG I +C+
Sbjct: 119 FSAFGNILSCK 129
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 51.6 bits (118), Expect = 2e-06
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHX 347
+ + + T+YVG LD V+E L LF Q G V + ++ + Y F+EF
Sbjct: 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
M+ + K ++VN A++ + D + IF+G+L PEI+ +L + F+
Sbjct: 66 DADYAIKIMDMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFS 121
Query: 528 PFGEI 542
FG I
Sbjct: 122 AFGVI 126
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 49.6 bits (113), Expect = 7e-06
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 371
+LYVG+L P VTE L F G + +I R+ + YA++ +
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 119
Query: 552 RI 557
++
Sbjct: 120 KV 121
Score = 33.9 bits (74), Expect = 0.40
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL PE+ +L E F+P G I + RI R
Sbjct: 4 LYVGDLHPEVTEAMLYEKFSPAGPILSIRICR 35
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 49.6 bits (113), Expect = 7e-06
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 371
+LYVG+L P VTE L F G + +I R+ + YA++ +
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 119
Query: 552 RI 557
++
Sbjct: 120 KV 121
Score = 33.9 bits (74), Expect = 0.40
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL PE+ +L E F+P G I + RI R
Sbjct: 4 LYVGDLHPEVTEAMLYEKFSPAGPILSIRICR 35
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 48.8 bits (111), Expect = 1e-05
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 371
+LYVG+L P VTE L F G + I R+ + YA++ +
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALET 105
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 106 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 162
Query: 552 RI 557
++
Sbjct: 163 KV 164
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++VGDL PE+ +L E F+P G I + I R
Sbjct: 47 LYVGDLHPEVTEAMLYEKFSPAGPILSISICR 78
>BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine
associated protein 1 protein.
Length = 287
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGD-VKGCKIIREPGND---PYAFLEFTCHXXXXXXXX 368
+L++G+L+P + E F+ F +G+ V KIIR Y F+EF
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 369 XMNKRVVLD----KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + + K K+N+AT G QP D S + +FVGDL+P+++ +L E F
Sbjct: 64 KINGKPLPGATPAKRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGMLYEFF 116
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGE-ISNCRIVR 563
+++GDL P ++ N + AFA GE + + +I+R
Sbjct: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIR 37
>AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine
associated protein (SECP43) protein.
Length = 287
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGD-VKGCKIIREPGND---PYAFLEFTCHXXXXXXXX 368
+L++G+L+P + E F+ F +G+ V KIIR Y F+EF
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 369 XMNKRVVLD----KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + + K K+N+AT G QP D S + +FVGDL+P+++ +L E F
Sbjct: 64 KINGKPLPGATPAKRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGMLYEFF 116
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGE-ISNCRIVR 563
+++GDL P ++ N + AFA GE + + +I+R
Sbjct: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIR 37
>AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ20503 fis, clone KAT09346. ).
Length = 287
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGD-VKGCKIIREPGND---PYAFLEFTCHXXXXXXXX 368
+L++G+L+P + E F+ F +G+ V KIIR Y F+EF
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 369 XMNKRVVLD----KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + + K K+N+AT G QP D S + +FVGDL+P+++ +L E F
Sbjct: 64 KINGKPLPGATPAKRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGMLYEFF 116
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGE-ISNCRIVR 563
+++GDL P ++ N + AFA GE + + +I+R
Sbjct: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIR 37
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 45.6 bits (103), Expect = 1e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXXXXXXX 371
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNL 69
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSP 491
+N + + +K+ + + + P+ + ++ VG+ SP
Sbjct: 70 LNGIKLYGRPIKIQFRSGSSHAPQDVSLSYPQYHVGNSSP 109
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXXXXXXX 371
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNL 69
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSP 491
+N + + +K+ + + + P+ + ++ VG+ SP
Sbjct: 70 LNGIKLYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSP 109
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXXXXXXX 371
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNL 69
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSP 491
+N + + +K+ + + + P+ + ++ VG+ SP
Sbjct: 70 LNGIKLYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSP 109
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXXXXXXX 371
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 16 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNL 75
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSP 491
+N + + +K+ + + + P+ + ++ VG+ SP
Sbjct: 76 LNGIKLYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSP 115
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 44.4 bits (100), Expect = 3e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXXXXXXX 371
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNL 69
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSP 491
+N + + +K+ + + + P+ + ++ VG+ SP
Sbjct: 70 LNGIRLYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSP 109
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 44.0 bits (99), Expect = 4e-04
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCH 344
N + L V L ++T+ +LFG IGD++ CK++R+ G D Y F+ +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDP 90
Query: 345 XXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + K +KV++A +P + + +++V L + + + F
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 525 APFGEISNCRIV 560
+ +G I RI+
Sbjct: 146 SQYGRIITSRIL 157
Score = 37.9 bits (84), Expect = 0.024
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSPE + ++L + F PFG ++N +++R
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 309
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 375 NKRVVLDKEMKVNWATS 425
N + ++ ++V++ TS
Sbjct: 338 NGYRLAERVLQVSFKTS 354
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 44.0 bits (99), Expect = 4e-04
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCH 344
N + L V L ++T+ +LFG IGD++ CK++R+ G D Y F+ +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDP 90
Query: 345 XXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + K +KV++A +P + + +++V L + + + F
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 525 APFGEISNCRIV 560
+ +G I RI+
Sbjct: 146 SQYGRIITSRIL 157
Score = 37.9 bits (84), Expect = 0.024
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSPE + ++L + F PFG ++N +++R
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 310
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 302
++V NL P E L LFG G V K+IR+
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 311
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 296
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 311 MTNYDEAAMAIRSLNGYRLGDRVLQVSFKTN 341
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 324 MTNYDEAAMAIRSLNGYRLGDRVLQVSFKTN 354
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 296
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 311 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 341
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 60 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 119
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 120 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 174
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 175 QYGRIITSRIL 185
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 306 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 337
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 292 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 351
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 352 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 382
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 309
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 354
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 147 QYGRIITSRIL 157
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 296
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 311 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 341
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 42.7 bits (96), Expect = 9e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHX 347
G+ KT L V L ++T+ L +LFG IG+++ CK++R+ G Y F+ +
Sbjct: 40 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 99
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 527
+N + K +KV++A +P + + +++V L + L + F+
Sbjct: 100 DAEKAINTLNGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFS 154
Query: 528 PFGEISNCRIV 560
+G I RI+
Sbjct: 155 QYGRIITSRIL 165
Score = 35.9 bits (79), Expect = 0.098
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +L+P+ + +IL + F PFG ++N +++R
Sbjct: 286 IFVYNLAPDADESILWQMFGPFGAVTNVKVIR 317
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 171 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLE 332
A + HP T ++V NL P E L +FG G V K+IR+ + + F+
Sbjct: 272 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 331
Query: 333 FTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 425
T + +N + D+ ++V++ T+
Sbjct: 332 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTN 362
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCH 344
N + L V L ++T+ +LFG IGD++ CK++R+ G Y F+ ++
Sbjct: 22 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDP 81
Query: 345 XXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + K +KV++A +P + + +++V L + + + F
Sbjct: 82 NDADKAINTLNGLKLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMSQKEMEQLF 136
Query: 525 APFGEISNCRIV 560
+ +G I RI+
Sbjct: 137 SQYGRIITSRIL 148
Score = 37.1 bits (82), Expect = 0.043
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSPE + ++L + F PFG ++N +++R
Sbjct: 269 IFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIR 300
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCH 344
N + L V L ++T+ +LFG IGD++ CK++R+ G Y F+ ++
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDP 90
Query: 345 XXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 524
+N + K +KV++A +P + + +++V L + + + F
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 525 APFGEISNCRIV 560
+ +G I RI+
Sbjct: 146 SQYGRIITSRIL 157
Score = 37.9 bits (84), Expect = 0.024
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSPE + ++L + F PFG ++N +++R
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 317
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 302
++V NL P E L LFG G V K+IR+
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 318
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 37 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 96
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 97 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 155
Query: 549 CRIVR 563
CRI+R
Sbjct: 156 CRILR 160
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 37 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 96
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 97 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 155
Query: 549 CRIVR 563
CRI+R
Sbjct: 156 CRILR 160
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 37 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 96
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 97 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 155
Query: 549 CRIVR 563
CRI+R
Sbjct: 156 CRILR 160
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 42 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 101
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 102 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 160
Query: 549 CRIVR 563
CRI+R
Sbjct: 161 CRILR 165
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + S +E L LF G V ++R+ +P F+ F
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ L M P + K++ +F+G +S + N +R F+PFG+I
Sbjct: 78 ALHNIKTLPG-MHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 41.5 bits (93), Expect = 0.002
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + +F+G +S + N +R F+ FG+I
Sbjct: 78 ALHNMKVLPG-MHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Query: 549 CRIVR 563
CRI+R
Sbjct: 137 CRILR 141
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 108 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 156
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Frame = +3
Query: 183 DESH-PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXX 350
D H P +++G L T+ L FGQ G+VK C ++R+P + + F+ F
Sbjct: 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF-MDQA 72
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 530
++ + K + A QPK T IFVG LS +++ F
Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT-KKIFVGGLSVNTTVEDVKQYFEQ 131
Query: 531 FGEISNCRIV 560
FG++ + ++
Sbjct: 132 FGKVDDAMLM 141
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
A PG + +F+G LS + LRE F FGE+ C ++R
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Frame = +3
Query: 183 DESH-PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXX 350
D H P +++G L T+ L FGQ G+VK C ++R+P + + F+ F
Sbjct: 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF-MDQA 72
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 530
++ + K + A QPK T IFVG LS +++ F
Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT-KKIFVGGLSVNTTVEDVKQYFEQ 131
Query: 531 FGEISNCRIV 560
FG++ + ++
Sbjct: 132 FGKVDDAMLM 141
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
A PG + +F+G LS + LRE F FGE+ C ++R
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 40.7 bits (91), Expect = 0.003
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHXXX 353
D+ + L++GNLD SV+EV L F + G ++ +I+ P YAFL+F
Sbjct: 5 DQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEV-VIKRPARGQGGAYAFLKFQNLDMA 63
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 533
M+ RV+ +K+ + + P T ++VG L P L F F
Sbjct: 64 HRAKVAMSGRVIGRNPIKIGYGKA---NPTT------RLWVGGLGPNTSLAALAREFDRF 114
Query: 534 GEI 542
G I
Sbjct: 115 GSI 117
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 261 GQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQP 440
G I ++ C+ + + YA++ F MN V+ K +++ W+ +
Sbjct: 10 GPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 69
Query: 441 KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
K+ N IF+ +L I+ L + F+ FG I +C++V
Sbjct: 70 KSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSCKVV 106
Score = 38.3 bits (85), Expect = 0.018
Identities = 23/123 (18%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXXXXXXXXXMNK 380
+++ NLD S+ L F G++ CK++ E G+ Y F+ F MN
Sbjct: 76 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 135
Query: 381 RVVLDKEMKVNWATSPGNQPK---TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
++ D+++ V S + ++++ + +++ L++ F FG +
Sbjct: 136 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 195
Query: 552 RIV 560
+++
Sbjct: 196 KVM 198
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHXXXXXXXXXMNK 380
LYV NLD + + L F G + K++ E G + F+ F+ MN
Sbjct: 271 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 330
Query: 381 RVVLDKEMKV 410
R+V K + V
Sbjct: 331 RIVATKPLYV 340
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYA------FLEF 335
++GD S LY+GN++P + E LC FG+ G + KI+ ++ A F+ F
Sbjct: 265 DVGDPS-TTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAF 323
Query: 336 TCHXXXXXXXXXMNKRVVLDKEMKVNW 416
+N ++++ EMK+ W
Sbjct: 324 MNRRDAERALKNLNGKMIMSFEMKLGW 350
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYA------FLEF 335
++GD S LY+GN++P + E LC FG+ G + KI+ ++ A F+ F
Sbjct: 266 DVGDPS-TTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAF 324
Query: 336 TCHXXXXXXXXXMNKRVVLDKEMKVNW 416
+N ++++ EMK+ W
Sbjct: 325 MNRRDAERALKNLNGKMIMSFEMKLGW 351
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 33/120 (27%), Positives = 50/120 (41%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ KT T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKTSTKLH----VGNISPTCTNKELRAKFEEYGPVIECDIVK 111
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 330
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 359 NGYRLGDRVLQVSFKTNKAHK 379
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 39.9 bits (89), Expect = 0.006
Identities = 33/120 (27%), Positives = 50/120 (41%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ KT T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKTSTKLH----VGNISPTCTNKELRAKFEEYGPVIECDIVK 111
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 39.9 bits (89), Expect = 0.006
Identities = 33/120 (27%), Positives = 50/120 (41%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ KT T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKTSTKLH----VGNISPTCTNKELRAKFEEYGPVIECDIVK 111
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 39.9 bits (89), Expect = 0.006
Identities = 33/120 (27%), Positives = 50/120 (41%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ KT T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKTSTKLH----VGNISPTCTNKELRAKFEEYGPVIECDIVK 111
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 39.9 bits (89), Expect = 0.006
Identities = 33/120 (27%), Positives = 50/120 (41%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ KT T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKTSTKLH----VGNISPTCTNKELRAKFEEYGPVIECDIVK 111
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 330
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 359 NGYRLGDRVLQVSFKTNKAHK 379
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 125 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 179
Query: 555 IV 560
I+
Sbjct: 180 IL 181
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 333
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 362 NGYRLGDRVLQVSFKTNKAHK 382
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 113 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 167
Query: 555 IV 560
I+
Sbjct: 168 IL 169
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 335
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 364 NGYRLGDRVLQVSFKTNKAHK 384
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 113 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 167
Query: 555 IV 560
I+
Sbjct: 168 IL 169
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 321
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 350 NGYRLGDRVLQVSFKTNKAHK 370
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 330
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 359 NGYRLGDRVLQVSFKTNKAHK 379
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 125 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 179
Query: 555 IV 560
I+
Sbjct: 180 IL 181
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 333
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 362 NGYRLGDRVLQVSFKTNKAHK 382
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 113 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 167
Query: 555 IV 560
I+
Sbjct: 168 IL 169
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 335
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 364 NGYRLGDRVLQVSFKTNKAHK 384
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 113 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 167
Query: 555 IV 560
I+
Sbjct: 168 IL 169
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 321
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 350 NGYRLGDRVLQVSFKTNKAHK 370
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 330
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 359 NGYRLGDRVLQVSFKTNKAHK 379
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 125 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 179
Query: 555 IV 560
I+
Sbjct: 180 IL 181
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 333
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 362 NGYRLGDRVLQVSFKTNKAHK 382
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.006
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L V L ++T+ +LFG IG+++ CK++R+ G Y F+ + +
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N + K +KV++A +P + + +++V L + L + F+ +G I R
Sbjct: 108 NGLRLQTKTIKVSYA-----RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 555 IV 560
I+
Sbjct: 163 IL 164
Score = 36.3 bits (80), Expect = 0.074
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSP+ + ++L + F PFG ++N +++R
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIR 316
Score = 31.5 bits (68), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++V NL P E L LFG G V K+IR+ + + F+ T + +
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 375 NKRVVLDKEMKVNWATSPGNQ 437
N + D+ ++V++ T+ ++
Sbjct: 345 NGYRLGDRVLQVSFKTNKAHK 365
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 39.1 bits (87), Expect = 0.011
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +3
Query: 252 TLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT 422
+LFG IGD++ CK++R+ G Y F+ ++ +N + K +KV++A
Sbjct: 8 SLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA- 66
Query: 423 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
+P + + +++V L + + + F+ +G I RI+
Sbjct: 67 ----RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRIL 108
Score = 37.9 bits (84), Expect = 0.024
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
IFV +LSPE + ++L + F PFG ++N +++R
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 268
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 302
++V NL P E L LFG G V K+IR+
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 269
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 38.7 bits (86), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-----YAFLEFTCHXXXXXXXX 368
++VG + + +E L LF Q G V ++R+ +P F+ F
Sbjct: 77 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 136
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ VL M P + K + + +F+G +S + N +R F+ FG+I
Sbjct: 137 ALHNMKVLPG-MHHPIQMKPADSEKNNVEDRK-LFIGMISKKCTENDIRVMFSSFGQIEE 194
Query: 549 CRIVR 563
CRI+R
Sbjct: 195 CRILR 199
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEFT 338
+ L++G + TE + +F G ++ C+I+R P + AF+ FT
Sbjct: 166 RKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFT 214
>BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCK-IIREPG---NDP--YAFLEFTCHXXXXXXX 365
L++GNLDP +TE L L + G VK + + G P Y F+ F
Sbjct: 27 LWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAI 86
Query: 366 XXMNKRVVLDKEMKVNWA 419
+N ++ L K++ V WA
Sbjct: 87 QCLNGKLALSKKLVVRWA 104
>BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCK-IIREPG---NDP--YAFLEFTCHXXXXXXX 365
L++GNLDP +TE L L + G VK + + G P Y F+ F
Sbjct: 27 LWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAI 86
Query: 366 XXMNKRVVLDKEMKVNWA 419
+N ++ L K++ V WA
Sbjct: 87 QCLNGKLALSKKLVVRWA 104
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.018
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEFTCHXXXXXXXXX 371
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 59 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 118
Query: 372 MNKRVVLDKEMKVNWA 419
MN + + ++ + V++A
Sbjct: 119 MNGQYLCNRPITVSYA 134
Score = 37.5 bits (83), Expect = 0.032
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 318 YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI 497
Y F+EF MN + K ++VN A++ + D + IF+G+L PEI
Sbjct: 13 YGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEI 68
Query: 498 ETNILREAFAPFGEI 542
+ +L + F+ FG I
Sbjct: 69 DEKLLYDTFSAFGVI 83
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.018
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEFTCHXXXXXXXXX 371
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 59 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 118
Query: 372 MNKRVVLDKEMKVNWA 419
MN + + ++ + V++A
Sbjct: 119 MNGQYLCNRPITVSYA 134
Score = 37.5 bits (83), Expect = 0.032
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 318 YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI 497
Y F+EF MN + K ++VN A++ + D + IF+G+L PEI
Sbjct: 13 YGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEI 68
Query: 498 ETNILREAFAPFGEI 542
+ +L + F+ FG I
Sbjct: 69 DEKLLYDTFSAFGVI 83
>AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCK-IIREPG---NDP--YAFLEFTCHXXXXXXX 365
L++GNLDP +TE L L + G VK + + G P Y F+ F
Sbjct: 27 LWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAI 86
Query: 366 XXMNKRVVLDKEMKVNWA 419
+N ++ L K++ V WA
Sbjct: 87 QCLNGKLALSKKLVVRWA 104
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.024
Identities = 32/120 (26%), Positives = 49/120 (40%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ K T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVK 111
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.024
Identities = 32/120 (26%), Positives = 49/120 (40%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L++GNL TE + +LF Q G V C II+ Y F+ ++
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-----YGFVHIEDKTAAEDAIRNLHHY 58
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+ + V + N+ K T H VG++SP LR F +G + C IV+
Sbjct: 59 KLHGVNINVE---ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVK 111
>AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 169 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 222
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 27 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 80
>AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 169 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 222
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.024
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 349 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 408
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 409 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 459
Query: 537 EI 542
I
Sbjct: 460 TI 461
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 359 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 418
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 419 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 469
Query: 537 EI 542
I
Sbjct: 470 TI 471
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 349 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 408
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 409 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 459
Query: 537 EI 542
I
Sbjct: 460 TI 461
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 37.1 bits (82), Expect = 0.043
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGS 41
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 325 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 384
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 385 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 435
Query: 537 EI 542
I
Sbjct: 436 TI 437
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 37.1 bits (82), Expect = 0.043
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPGNDPYAFLEFTCHXXXX 356
D+ +TL++GNLD +VTE L F + G + I R Y FL+F
Sbjct: 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSH 428
Query: 357 XXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 536
M+ ++++ +K+ + + P T ++VG L P + L F FG
Sbjct: 429 RAKLAMSGKIIIRNPIKIGYGKA---TPTT------RLWVGGLGPWVPLAALAREFDRFG 479
Query: 537 EI 542
I
Sbjct: 480 TI 481
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 36.7 bits (81), Expect = 0.056
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGS 41
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 36.7 bits (81), Expect = 0.056
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGS 41
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 109 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 168
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 169 ADRAREKLHGTVVEGRKIEVNNATA 193
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 109 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 168
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 169 ADRAREKLHGTVVEGRKIEVNNATA 193
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 89 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 148
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 149 ADRAREKLHGTVVEGRKIEVNNATA 173
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 129 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 188
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 189 ADRAREKLHGTVVEGRKIEVNNATA 213
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 36.7 bits (81), Expect = 0.056
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCHXX 350
N ++S PK L+V N+ + L +FGQ G + +II E G+ + F+ F
Sbjct: 150 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 209
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
++ VV ++++VN AT+
Sbjct: 210 ADRAREKLHGTVVEGRKIEVNNATA 234
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 36.3 bits (80), Expect = 0.074
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF-TCHXXXXXXXXXMN 377
TLYVG L ++TE L F Q G+++ +++ AF++F T N
Sbjct: 180 TLYVGGLGDTITETDLRNHFYQFGEIRTITVVQ---RQQCAFIQFATRQAAEVAAEKSFN 236
Query: 378 KRVVLDKEMKVNWATSPGNQPK 443
K +V + + V W S + K
Sbjct: 237 KLIVNGRRLNVKWGRSQAARGK 258
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 36.3 bits (80), Expect = 0.074
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 171 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXX 350
A+ +E K +++G L T+ L F + G+V C + +P F
Sbjct: 68 ASKNEEDEGK-MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 126
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAF 524
M++ KE K+N + K + IFVG LSP+ +RE F
Sbjct: 127 SESVDKVMDQ-----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 181
Query: 525 APFGEISNCRI 557
FGE+ + +
Sbjct: 182 GGFGEVESIEL 192
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 144 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 192
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 36.3 bits (80), Expect = 0.074
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 171 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXX 350
A+ +E K +++G L T+ L F + G+V C + +P F
Sbjct: 1 ASKNEEDEGK-MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 59
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAF 524
M++ KE K+N + K + IFVG LSP+ +RE F
Sbjct: 60 SESVDKVMDQ-----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 114
Query: 525 APFGEISNCRI 557
FGE+ + +
Sbjct: 115 GGFGEVESIEL 125
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 77 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 125
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 36.3 bits (80), Expect = 0.074
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF-TCHXXXXXXXXXMN 377
TLYVG L ++TE L F Q G+++ +++ AF++F T N
Sbjct: 233 TLYVGGLGDTITETDLRNHFYQFGEIRTITVVQ---RQQCAFIQFATRQAAEVAAEKSFN 289
Query: 378 KRVVLDKEMKVNWATSPGNQPK 443
K +V + + V W S + K
Sbjct: 290 KLIVNGRRLNVKWGRSQAARGK 311
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 36.3 bits (80), Expect = 0.074
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF-TCHXXXXXXXXXMN 377
TLYVG L ++TE L F Q G+++ +++ AF++F T N
Sbjct: 233 TLYVGGLGDTITETDLRNHFYQFGEIRTITVVQ---RQQCAFIQFATRQAAEVAAEKSFN 289
Query: 378 KRVVLDKEMKVNWATSPGNQPK 443
K +V + + V W S + K
Sbjct: 290 KLIVNGRRLNVKWGRSQAARGK 311
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.074
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 171 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXX 350
A+ +E K +++G L T+ L F + G+V C + +P F
Sbjct: 70 ASKNEEDEGK-MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 128
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAF 524
M++ KE K+N + K + IFVG LSP+ +RE F
Sbjct: 129 SESVDKVMDQ-----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 183
Query: 525 APFGEISNCRI 557
FGE+ + +
Sbjct: 184 GGFGEVESIEL 194
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 146 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 194
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 35.9 bits (79), Expect = 0.098
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXX 350
M + HP L++G L+ E L +FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD 60
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQ 437
MN + + K +KV A P Q
Sbjct: 61 AKNAAKDMNGKSLHGKAIKVEQAKKPSFQ 89
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 35.9 bits (79), Expect = 0.098
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXX 350
M + HP L++G L+ E L +FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD 60
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQ 437
MN + + K +KV A P Q
Sbjct: 61 AKNAAKDMNGKSLHGKAIKVEQAQKPSFQ 89
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 35.9 bits (79), Expect = 0.098
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXX 350
M + HP L++G L+ E L +FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD 60
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQ 437
MN + + K +KV A P Q
Sbjct: 61 AKNAAKDMNGKSLHGKAIKVEQAKKPSFQ 89
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 35.5 bits (78), Expect = 0.13
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F FG+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein.
Length = 387
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.13
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F FG+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXM 374
L+V L+P T+ L +F + G ++ C++IR+ G YAF+EF M
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 375 NKRVVLDKEMKVNWATS 425
+ ++ D+ + V+++ S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 136
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 137 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 192
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 144 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 192
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 8 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 66
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 67 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 122
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 74 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 122
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 91 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 149
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 150 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 205
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 157 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 205
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.17
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
+++G L T+ L F + G+V C + +P F M++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ- 157
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCRI 557
KE K+N + K + IFVG LSP+ +RE F FGE+ + +
Sbjct: 158 ----KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 147 KVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 293
KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 165 KVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 213
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHX 347
M + P L++G L+ E L T+FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSP 428
MN + + K +KV AT P
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATKP 87
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXX 350
M + HP L++G L+ E L +FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD 60
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQ 437
MN + K +KV A P Q
Sbjct: 61 AKNAAKDMNGTSLHGKAIKVEQAKKPSFQ 89
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHX 347
M + P L++G L+ E L T+FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSP 428
MN + + K +KV AT P
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATKP 87
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHX 347
M + P L++G L+ E L T+FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSP 428
MN + + K +KV AT P
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATKP 87
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 177 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHX 347
M + P L++G L+ E L T+FG+ G + +I++ + +AF+ F
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 348 XXXXXXXXMNKRVVLDKEMKVNWATSP 428
MN + + K +KV AT P
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATKP 87
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.30
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 171 ANMGDESHPKTL----YVGNLDPSVTE-VFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+N+ +++ PK++ ++GNL+ ++ + V + +F + G + GC + + YAF+++
Sbjct: 8 SNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSV-----HKGYAFVQY 62
Query: 336 TCHXXXXXXXXXMNKRVVLDKEMKVNWATSP 428
N RV+ + + +N A P
Sbjct: 63 MSERHARAAVAGENARVIAGQPLDINMAGEP 93
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.30
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ L++G L T+ L + F Q G + C ++R+P F + MN
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
R V + ++ A S + + IFVG + + E + LR+ F +G+I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 549 CRIV 560
I+
Sbjct: 134 IEIM 137
>AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isoform
2 protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.30
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 171 ANMGDESHPKTL----YVGNLDPSVTE-VFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+N+ +++ PK++ ++GNL+ ++ + V + +F + G + GC + + YAF+++
Sbjct: 8 SNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSV-----HKGYAFVQY 62
Query: 336 TCHXXXXXXXXXMNKRVVLDKEMKVNWATSP 428
N RV+ + + +N A P
Sbjct: 63 MSERHARAAVAGENARVIAGQPLDINMAGEP 93
>AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isoform
1 protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.30
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 171 ANMGDESHPKTL----YVGNLDPSVTE-VFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+N+ +++ PK++ ++GNL+ ++ + V + +F + G + GC + + YAF+++
Sbjct: 8 SNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSV-----HKGYAFVQY 62
Query: 336 TCHXXXXXXXXXMNKRVVLDKEMKVNWATSP 428
N RV+ + + +N A P
Sbjct: 63 MSERHARAAVAGENARVIAGQPLDINMAGEP 93
>U21663-1|AAB02393.1| 366|Homo sapiens DAZ protein protein.
Length = 366
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>BC114927-1|AAI14928.1| 613|Homo sapiens DAZ1 protein protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 204 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 252
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 369 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 417
>BC113006-1|AAI13007.1| 534|Homo sapiens deleted in azoospermia 2
protein.
Length = 534
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>BC113005-1|AAI13006.1| 438|Homo sapiens deleted in azoospermia 3
protein.
Length = 438
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>BC047617-1|AAH47617.1| 390|Homo sapiens deleted in azoospermia 4
protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>BC047480-1|AAH47480.1| 390|Homo sapiens deleted in azoospermia 4
protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 33.9 bits (74), Expect = 0.40
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 423 SPGNQPKTDTSNHH--HIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
S G + S H +F+G LS + + LR+ F+ FGEI C ++R
Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMR 54
>AF414184-1|AAL24502.1| 534|Homo sapiens deleted in azoospermia 2
protein.
Length = 534
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>AF271088-1|AAF91406.1| 501|Homo sapiens deleted in azoospermia
protein.
Length = 501
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 126 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 174
>AF271087-1|AAF91405.1| 458|Homo sapiens deleted in azoospermia
protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 83 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 131
>AF248483-1|AAF91332.1| 413|Homo sapiens deleted in azoospermia 4
protein.
Length = 413
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 38 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIISNRTGVSKGYGFVSF 86
>AF248482-1|AAF91331.1| 331|Homo sapiens deleted in azoospermia 4
protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 204 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 252
>AF248481-1|AAF91330.1| 486|Homo sapiens deleted in azoospermia 3
protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>AF248480-1|AAF91329.1| 558|Homo sapiens deleted in azoospermia 2
protein.
Length = 558
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGNDPYAFLEF 335
P T++VG +D + E + + FG+ G VK KII R + Y F+ F
Sbjct: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
>DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 104
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 105 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 152
>BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 140
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 141 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 188
>BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 140
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 141 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 188
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 140
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 141 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 188
>AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 104
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 105 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 152
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 140
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 141 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 188
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 33.5 bits (73), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL +TE LF + G+ I R+ G + F+ ++
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRG---FGFIRLESRTLAEIAKAELDGT 140
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIV 560
++ + +++ +AT + V +LSP + +L +AF+ FG + +V
Sbjct: 141 ILKSRPLRIRFATHGAA-----------LTVKNLSPVVSNELLEQAFSQFGPVEKAVVV 188
>AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.52
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRI 557
++VG L+ E++ +L AF PFG+I++ +I
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQI 37
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 33.1 bits (72), Expect = 0.69
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+YVGNL P + + +F + G ++ + G P+AF+EF
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 33.1 bits (72), Expect = 0.69
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+YVGNL P + + +F + G ++ + G P+AF+EF
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.69
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+YVGNL P + + +F + G ++ + G P+AF+EF
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 33.1 bits (72), Expect = 0.69
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 335
+YVGNL P + + +F + G ++ + G P+AF+EF
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEF 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,355,231
Number of Sequences: 237096
Number of extensions: 1639469
Number of successful extensions: 4644
Number of sequences better than 10.0: 409
Number of HSP's better than 10.0 without gapping: 3822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4420
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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