Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j19
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.015
SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.015
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.015
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 34 0.015
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 29 0.42
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 29 0.42
SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyce... 29 0.56
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 29 0.74
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 29 0.74
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 2.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.3
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 27 2.3
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 27 3.0
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 26 3.9
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 26 3.9
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 26 3.9
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 26 3.9
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 26 5.2
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.2
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 5.2
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 5.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 6.9
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 9.1
>SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 220 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 396
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 397 RMSFEDEAFNVVLDKGTLDALM 462
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 220 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 396
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 397 RMSFEDEAFNVVLDKGTLDALM 462
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 34.3 bits (75), Expect = 0.015
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +1
Query: 301 ITNVDVSEVVIKQMKNVNKART---NMKFMCMDATRMS-FEDEAFNVVLDKGTLDAL-MP 465
+ VD SE I KN+ + R +KF +D + S F + ++++LDKGT DA+ +
Sbjct: 96 LVGVDYSEAAIVLAKNIARHRQFSDKVKFQQLDIIKDSKFCSKDWDLILDKGTFDAISLS 155
Query: 466 DATEETNAIIDKYFSEIKRVLKLGGRFVCIS 558
+ + Y ++ +L G F+ S
Sbjct: 156 GELLDGRPLNSVYVDRVRGMLSPNGIFLITS 186
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 220 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 396
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 397 RMSFEDEAFNVVLDKGTLDALM 462
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 29.5 bits (63), Expect = 0.42
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 241 ITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKAR-TNM 372
I GC NSSL Y G V I + + IK + N+N + TNM
Sbjct: 47 IAGCANSSLEIVNYIPGSVGIEKLIEAVPAIKAIANINGVQVTNM 91
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 29.5 bits (63), Expect = 0.42
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 241 ITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKAR-TNM 372
I GC NSSL Y G V I + + IK + N+N + TNM
Sbjct: 47 IAGCANSSLEIVNYIPGSVGIEKLIEAVPAIKAIANINGVQVTNM 91
>SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 29.1 bits (62), Expect = 0.56
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +1
Query: 211 KYIKTKDSILITGCGNSSLSADL--Y----DVGYVNITN--VDVSEVVIKQMKNVNKAR- 363
KY+K D IL GCG +++ Y +V V + +D +E +++ + + K +
Sbjct: 36 KYVKKTDRILDVGCGPGTITVGFPKYVPEGEVIGVEPSQELLDKAEEALRKEETLKKEKI 95
Query: 364 TNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGR 543
N F ++ F D F++V L L + A++ E+KRV K GG
Sbjct: 96 NNCSFRLGSIYKLPFPDNTFDIVNTHQVLVHLQ----DPVAALV-----ELKRVTKPGG- 145
Query: 544 FVC 552
+VC
Sbjct: 146 YVC 148
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 208 NKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIK--QMKNVNK 357
N ++ +L GCG LS G ++ VD+SE++ K Q+ VNK
Sbjct: 49 NPHLFRDKIVLDVGCGTGILSMFCARAGAKHVYGVDMSEIIHKAVQIVEVNK 100
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 28.7 bits (61), Expect = 0.74
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 86 IYYREVTKNSAKKIIGTNSSENGEIKHSNGTA 181
I YR V + K I TN EN I+HS+G A
Sbjct: 846 IQYRHVLDVNYKPKIVTNEVENENIEHSDGAA 877
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 208 NKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKN 348
NK+I ++L GCG LS G + VD S+++ + N
Sbjct: 250 NKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMAISN 296
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 283 DVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALM 462
+V +N+ ++S V K + ++N+ +D T S + F K + D
Sbjct: 1055 EVASMNVRLEELSTRVSKMLSDINE---------VDHTIASLSLKLFQAEDTKNSYDQTS 1105
Query: 463 PDATEETNAIIDKYFSEIKR 522
P+AT+E N I +E+++
Sbjct: 1106 PEATQERNRTISSKLAEMEK 1125
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 247 GCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNK 357
G SSLS + G+ I + VSE VI KNVNK
Sbjct: 2 GSDGSSLSPKVSQPGHTEIVD-HVSEKVITNGKNVNK 37
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 181 EYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVG 291
E+ ELC + +KY T ++ I N++L ++++ G
Sbjct: 500 EFYELCKKWDKYDDTLMNVFIKNTKNTALPDEVFEPG 536
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 373 SYWFWLCLRFS 341
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 373 SYWFWLCLRFS 341
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 26.2 bits (55), Expect = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 373 SYWFWLCLRFS 341
SYW W CL FS
Sbjct: 84 SYWIWTCLHFS 94
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 373 SYWFWLCLRFS 341
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 464 GIRASRVPLSNTTLNASS 411
G+ A+++PLSNTT+ S+
Sbjct: 1513 GVAANKLPLSNTTIEGSA 1530
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 76 FIMNLLPRSHKEFSEKDYWNKFFRKRGNKAFEWYGEYL 189
FI L+ +S + S+ D WN++ AF W G +L
Sbjct: 201 FIGGLMAKSSMK-SQSDIWNEYTSGNWLMAFIWVGLFL 237
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 261 KFERGPIRCWIC--KYNKCGC 317
K+E+ RCWIC +Y+K C
Sbjct: 6 KYEKSSARCWICYEEYDKKLC 26
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 422 NASSSKDILVASMHINFILVLALFTFFICL 333
++SSS V+S+ NF + A F+CL
Sbjct: 4 SSSSSTSAFVSSLVFNFAIFCAFIGLFLCL 33
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 136 KFFRKRGNKAFEWYGEYLELCGQLNKYIKT 225
K F+ + + EW YL L +L Y+KT
Sbjct: 234 KEFKGKDDLQIEWVRSYLTLLTELITYVKT 263
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 190 LNIRRTIRMLYFPVF*RICSNNLFR*ILC 104
LN++ T+ + FP RICSN+LF +LC
Sbjct: 693 LNVQ-TVSVKGFPR--RICSNSLFYFVLC 718
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,482,021
Number of Sequences: 5004
Number of extensions: 49615
Number of successful extensions: 183
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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