Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j19
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 132 3e-31
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811... 100 8e-22
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 91 5e-19
11_06_0082 + 19891184-19891332,19891349-19891445,19891584-198917... 69 2e-12
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 47 1e-05
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 46 2e-05
07_03_1543 + 27582033-27582387,27583638-27583706,27583790-275838... 41 0.001
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 38 0.005
01_06_0361 + 28733493-28733523,28733743-28733870,28733982-287340... 37 0.012
01_07_0375 - 43152161-43152262,43152556-43152664,43153433-431535... 33 0.14
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 31 0.76
02_01_0042 + 295608-296222,298479-298925 29 2.3
06_01_0238 + 1815258-1815581,1816286-1816530,1816612-1816765,181... 29 3.1
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 28 5.4
04_04_1544 - 34273909-34274220,34274340-34274769,34274933-342750... 28 7.1
03_06_0294 + 32893050-32893340,32894540-32895322 28 7.1
11_06_0584 - 25220371-25222917 27 9.4
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 132 bits (318), Expect = 3e-31
Identities = 74/176 (42%), Positives = 105/176 (59%), Gaps = 12/176 (6%)
Frame = +1
Query: 109 EFSEKDYWNKFFRKRGN-KAFEWYGEYLELCGQLNKYIK---------TKDSILITGCGN 258
+F+ ++ W+KFF RG +FEWY E+ +L L + IL+ GCG+
Sbjct: 25 DFTSRENWDKFFALRGTGDSFEWYAEWDDLRAPLLSLLHGGGGAEGGGKAPEILVPGCGS 84
Query: 259 SSLSADLYDVGYVNITNVDVSEVVIKQM-KNVNKARTNMKFMCMDATRMSFEDEAFNVVL 435
S LS LYD G+ +TNVD S V++ M + +AR M++ MD T M F D +F+V+L
Sbjct: 85 SVLSERLYDAGFRRVTNVDFSRVLVADMLRRHARARPEMRWRVMDMTDMQFTDGSFDVIL 144
Query: 436 DKGTLDALM-PDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQSHILAKLMEGF 600
DKG LDALM P+A + KY +E KRVLK GG+F C++L +SH+LA L+ F
Sbjct: 145 DKGGLDALMEPEAGTKLGM---KYLNEAKRVLKSGGKFACLTLAESHVLALLLSEF 197
>08_02_1260 -
25680618-25680677,25680763-25680893,25681085-25681163,
25681250-25681280,25681358-25681410,25681441-25681511,
25681610-25681678,25681776-25681889,25683101-25683293
Length = 266
Score = 100 bits (240), Expect = 8e-22
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +1
Query: 112 FSEKDYWNKFFRKRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVG 291
+ E YW++ +RK F+WY +Y L L Y++ +L+ GCGNS ++ D G
Sbjct: 16 YGEAWYWDERYRKEAGP-FDWYQKYPALAPLLAVYVRRHHRLLLAGCGNSVFGENMVDDG 74
Query: 292 YVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMS-FEDEAFNVVLDKGTLDALM 462
Y +I N+D+S VVI QMK + + ++K+M MD M+ FE +F+ V+DKGTLD++M
Sbjct: 75 YQDIVNIDISSVVIDQMKKKYRDKPHLKYMKMDVRNMAEFESGSFDAVIDKGTLDSIM 132
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 91.5 bits (217), Expect = 5e-19
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +1
Query: 154 GNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVI 333
G F+WY Y L L + +L+ GCGNS LS D+ GY + NVD+S VVI
Sbjct: 36 GGAFFDWYQAYPALRPLLRARLPASSRVLMLGCGNSLLSEDMVKDGYEEVVNVDISSVVI 95
Query: 334 KQMKNVNKARTNMKFMCMDATRMS-FEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFS 510
+QM+ + + + MD MS F D F+ VLDKGTLDA+M ++ K +
Sbjct: 96 EQMREKHVDIPQLTYFQMDVRDMSLFGDGTFDCVLDKGTLDAMM--CGDDAPLGASKMLA 153
Query: 511 EIKRVLKLGGRFVCI 555
E+ R+L+ GG ++ +
Sbjct: 154 EVARILRPGGIYMLV 168
>11_06_0082 +
19891184-19891332,19891349-19891445,19891584-19891725,
19891853-19891935,19892356-19892490,19892759-19892863,
19893043-19893168
Length = 278
Score = 69.3 bits (162), Expect = 2e-12
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Frame = +1
Query: 166 FEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVN-ITNVDVSEVVIKQM 342
+EW+ ++ L + S+L GCGNS L +L G IT VD+S V +++M
Sbjct: 60 YEWFKDFSHFRHLLAPLLSPSISVLEVGCGNSRLGEELLREGVAGGITCVDLSPVAVQRM 119
Query: 343 KN--VNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETN---AIID--- 498
++ + ++ + D + F+ E+F++V++KGT+D L D+ + N +D
Sbjct: 120 RDRLAEQGTEGVEVVVADMLDLPFDRESFDLVIEKGTMDVLFVDSGDPWNPNPTTVDNVM 179
Query: 499 KYFSEIKRVLKLGGRFVCISLLQSHILAKLME 594
K I +VLK G FV I+ Q H + E
Sbjct: 180 KMLEGIHKVLKPEGIFVSITFGQPHFRRRFFE 211
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +1
Query: 235 ILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNV--NKARTNMKFMCMDATRMSF 408
+L G GN L L G+ N+T D SE I+ KN+ T++ F+ D
Sbjct: 251 VLDVGTGNGLLLQALAKQGFSNLTGTDYSEGAIELAKNLAARDGFTSINFLVDDILETKL 310
Query: 409 EDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGRFVCIS 558
D F +V DKGTLDA+ ++ Y+ + +++ GG V S
Sbjct: 311 -DRKFKIVTDKGTLDAIGLHPDGRIKRVM--YWESVSNLVEPGGIVVVTS 357
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Frame = +1
Query: 91 LPRSHKEFSEKDYWNKFFRKRGNKAFEWYG-EYLELCGQLNKYI-KTKD----SILITGC 252
LP H++ S +Y F + + +W+G E +++ K + KD S+L G
Sbjct: 123 LPNYHQDGSYAEYLANFQER--SHTDDWFGTENMDVLVSWTKNLCSNKDLRSCSVLDIGT 180
Query: 253 GNSSLSADLYDVGYVNITNVDVSEVVIKQMKN--VNKARTNMKFMCMDATRMSFEDEAFN 426
G+ LS L G+ ++T +D SE I+ +N + ++ F+ D E F
Sbjct: 181 GSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIRDGFEHINFLVDDVLESKLE-RRFE 239
Query: 427 VVLDKGTLDAL 459
+V+D+GTLD +
Sbjct: 240 LVMDEGTLDTI 250
>07_03_1543 +
27582033-27582387,27583638-27583706,27583790-27583809,
27584186-27584267,27584512-27584711
Length = 241
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = +1
Query: 112 FSEKDYWNKFFRKRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVG 291
+ + +YW+ + + G ++WY Y L + ++ + +L+ GCG++ + D D+
Sbjct: 69 YGKAEYWDARYVEEGGAPYDWYQRYAALRPFVRRFAPPESRVLMIGCGSAHMQMDARDMS 128
Query: 292 YVNITNVD 315
+ + D
Sbjct: 129 IFSDESFD 136
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 379 MCMDATRMS-FEDEAFNVVLDKGTLDALM 462
M MDA MS F DE+F+ +DKGTLD+LM
Sbjct: 120 MQMDARDMSIFSDESFDCAIDKGTLDSLM 148
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 38.3 bits (85), Expect = 0.005
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 232 SILITGCGNSSLSADLY-DVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATR--M 402
S+L G G + +L + G+V +D E VIK+ +N+N N+ FMC D T +
Sbjct: 61 SVLELGAGIGRFTGELAKEAGHV--LALDFIESVIKKNENINGHHKNITFMCADVTSPDL 118
Query: 403 SFEDEAFNVVLDKGTLDALMPDATEETNAIIDKY---FSEIKRVLKLGGRF 546
+ ED + +++ L L + E+ + K+ F E K GG +
Sbjct: 119 TIEDNSIDLIFSNWLLMYLSDEEVEKLVGRMVKWLKIFKECHSYDKDGGSY 169
>01_06_0361 +
28733493-28733523,28733743-28733870,28733982-28734044,
28735074-28735211,28735357-28735494,28735700-28735843,
28736065-28736175,28736260-28736401,28736469-28736779,
28737057-28737218,28737313-28737366,28737472-28737546,
28737636-28737731
Length = 530
Score = 37.1 bits (82), Expect = 0.012
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 175 YGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVN 354
Y Y+ + L Y S+L G G + +L ++ +D E VIK+ +++N
Sbjct: 69 YSSYVVILSLLPPY--EGKSVLELGAGIGRFTGELVKTAG-HVLAMDFIESVIKKNESIN 125
Query: 355 KARTNMKFMCMDAT--RMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVL 528
N FMC D T + ED + +++ L L + EE ++K + R L
Sbjct: 126 GHHKNASFMCADVTCPDLMIEDNSIDLIFSNWLLMYL---SDEE----VEKLVKRMVRWL 178
Query: 529 KLGG 540
K+GG
Sbjct: 179 KVGG 182
>01_07_0375 -
43152161-43152262,43152556-43152664,43153433-43153504,
43153690-43153834,43153930-43154085,43154557-43154618,
43154695-43155020
Length = 323
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 388 DATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQ 567
DA +SFED + +D T+ + + T I+K SE RVLK GGRF+C+ L
Sbjct: 195 DAEALSFEDGS----MDGYTIAFGIRNVTH-----IEKALSEAYRVLKRGGRFLCLEL-- 243
Query: 568 SHI 576
SH+
Sbjct: 244 SHV 246
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +1
Query: 313 DVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDAL 459
++ E++ ++ + + ++ +CM+A R++ E E + +D G DA+
Sbjct: 560 EIGEMMSREFTGMEDQPSELEVVCMEARRLAIEREESSTEIDSGDEDAI 608
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 521 LLISEKYLSIMAFVSSVASGIRASRVPLSNTTLNASSSKDILVASMHIN 375
LLI + ++ +V+ SG ASRV S T L++S + +L + +N
Sbjct: 152 LLIVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVN 200
>06_01_0238 +
1815258-1815581,1816286-1816530,1816612-1816765,
1817043-1817257,1817351-1817468,1817685-1817895,
1818133-1818194,1818306-1818524
Length = 515
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +1
Query: 82 MNLLPRSHKEFSEKDYWNKFFRKRGNKAFEWYGEYLELCGQLNKYIK-----TKDSILIT 246
+ L+ R + D W++F+ K G K Y+E Y T ++ +
Sbjct: 285 LRLMERFGVKAEHSDSWDRFYIKGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVQ 344
Query: 247 GCGNSSLSADL 279
GCG +SL D+
Sbjct: 345 GCGTTSLQGDV 355
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 554 MQTKRPPSFKTLL-ISEKYLSIMAFVSSVAS-GIRASRV 444
+Q + PP L +S+ Y S++ FV SVA G+ +SR+
Sbjct: 104 LQVRPPPPMPGFLPVSQSYSSLVRFVLSVARFGVESSRI 142
>04_04_1544 -
34273909-34274220,34274340-34274769,34274933-34275030,
34275178-34275280,34275386-34275471,34275590-34275677,
34275773-34275886,34275975-34276179,34276530-34276557
Length = 487
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 346 NVNKARTNMKFMCMDATRMSFEDEAFN----VVLDKGTLDALMPDATEETNAIIDKYFSE 513
N++KA N + M A R + E E + V L L ++PDATE T ++ ++ S+
Sbjct: 336 NLHKATGNPVLVYMAAGRFAQEVEKLSDKEAVDLVMSHLKKMLPDATEPTKYLVSRWGSD 395
>03_06_0294 + 32893050-32893340,32894540-32895322
Length = 357
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 98 EVTKNSAKKIIGTNSSENGEIKHSNGTAN 184
E A++ + ++SSE+G+IK SNG N
Sbjct: 285 EANGGKAQQDVASSSSEHGKIKPSNGELN 313
>11_06_0584 - 25220371-25222917
Length = 848
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +1
Query: 331 IKQMKNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFS 510
+ +KN+ K ++K++ + T +S + N +L TLD + D A+ D + +
Sbjct: 476 MSHLKNICKLVPSLKYLSLRKTNVSQLPKKMNRLLHLETLD--IRDTNVRGAAMRDIFLN 533
Query: 511 EIKRVL 528
E+K +L
Sbjct: 534 ELKHLL 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,550,246
Number of Sequences: 37544
Number of extensions: 266432
Number of successful extensions: 723
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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