Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j18
         (509 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VQM2 Cluster: CG12400-PA; n=2; Sophophora|Rep: CG1240...   116   3e-25
UniRef50_UPI0000D55CE1 Cluster: PREDICTED: similar to CG12400-PA...   107   1e-22
UniRef50_Q178D3 Cluster: NADH-ubiquinone oxidoreductase subunit ...   103   2e-21
UniRef50_UPI00015B59AD Cluster: PREDICTED: similar to CG12400-PA...    71   1e-11
UniRef50_UPI000058523F Cluster: PREDICTED: similar to GA11610-PA...    58   9e-08
UniRef50_O95298 Cluster: NADH dehydrogenase [ubiquinone] 1 subun...    54   2e-06
UniRef50_UPI00005169FC Cluster: PREDICTED: hypothetical protein ...    48   1e-04
UniRef50_Q5BJK4 Cluster: Zgc:110155; n=2; Euteleostomi|Rep: Zgc:...    38   0.10 
UniRef50_Q9BL33 Cluster: Putative uncharacterized protein; n=2; ...    37   0.31 
UniRef50_Q8NVW6 Cluster: BsaB protein; n=7; Staphylococcus aureu...    34   1.6  
UniRef50_A5BRX9 Cluster: Putative uncharacterized protein; n=9; ...    34   2.2  
UniRef50_A2E821 Cluster: B-box zinc finger family protein; n=1; ...    34   2.2  
UniRef50_Q5ZTP6 Cluster: Hypothetical phage AbiD protein; n=1; L...    33   3.8  
UniRef50_A5B471 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  

>UniRef50_Q9VQM2 Cluster: CG12400-PA; n=2; Sophophora|Rep:
           CG12400-PA - Drosophila melanogaster (Fruit fly)
          Length = 116

 Score =  116 bits (279), Expect = 3e-25
 Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +3

Query: 114 LGDEGRQKP-FLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSY 290
           L ++G  +P FL+  W  I     G+G  +F+N+  ++PVFSGIQKHI      V   +Y
Sbjct: 11  LTNKGTHEPSFLSPIWNPIACGVAGVGAAIFINWGFRKPVFSGIQKHIAFGAIGVGAGAY 70

Query: 291 VQHKRNEYLAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
              KRNEYLA++DAV RHYIELHPDDFPV ERK  G + E W+PVR
Sbjct: 71  FDQKRNEYLAKRDAVLRHYIELHPDDFPVKERKTYGQVLESWVPVR 116


>UniRef50_UPI0000D55CE1 Cluster: PREDICTED: similar to CG12400-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG12400-PA - Tribolium castaneum
          Length = 120

 Score =  107 bits (257), Expect = 1e-22
 Identities = 46/103 (44%), Positives = 64/103 (62%)
 Frame = +3

Query: 120 DEGRQKPFLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSYVQH 299
           DE R   F++KYW   IG        +  N+  K+P+ SGIQ H++ T G  ++  Y+  
Sbjct: 18  DETRIPSFMSKYWAPGIGGGSAFIAMLITNWFLKKPILSGIQAHVLVTAGGAALGKYIDD 77

Query: 300 KRNEYLAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
            RN Y AE+DA +RHYI+LHP+DFP   RKK  ++ EPWIP+R
Sbjct: 78  YRNNYFAERDAAFRHYIQLHPEDFPDFTRKKYSEVLEPWIPIR 120


>UniRef50_Q178D3 Cluster: NADH-ubiquinone oxidoreductase subunit
           B14.5b; n=2; Culicidae|Rep: NADH-ubiquinone
           oxidoreductase subunit B14.5b - Aedes aegypti
           (Yellowfever mosquito)
          Length = 114

 Score =  103 bits (248), Expect = 2e-21
 Identities = 45/98 (45%), Positives = 62/98 (63%)
 Frame = +3

Query: 135 KPFLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSYVQHKRNEY 314
           K +L+  W    G   G     ++N+ + RP+FSGIQKH++A  G  ++   +   R +Y
Sbjct: 17  KSWLHDKWAPGAGGVLGFMGACYVNWGSGRPLFSGIQKHVVAAVGLGALALTMDKWRTQY 76

Query: 315 LAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
            AEKDA  RHY+ELHP+DFP PERKK  D+FE W P+R
Sbjct: 77  FAEKDATLRHYVELHPEDFPTPERKKFADVFESWQPIR 114


>UniRef50_UPI00015B59AD Cluster: PREDICTED: similar to CG12400-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG12400-PA - Nasonia vitripennis
          Length = 120

 Score = 71.3 bits (167), Expect = 1e-11
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = +3

Query: 120 DEGRQKPFLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSYVQH 299
           D   Q+ F++K +P I+     +G   ++ +   RP +SG++++  A    +     ++ 
Sbjct: 18  DPNYQENFISKNYPWIVWPFVSLGGNAYVTYLQGRPWYSGVRRYTFALTAGLIAAKVLKD 77

Query: 300 KRNEYLAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
            +    AE+DAV RHYI+LHP+DFP P RK   +    W+  R
Sbjct: 78  AKYHREAERDAVMRHYIKLHPEDFPPPVRKTFNEELRDWVACR 120


>UniRef50_UPI000058523F Cluster: PREDICTED: similar to GA11610-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA11610-PA - Strongylocentrotus purpuratus
          Length = 109

 Score = 58.4 bits (135), Expect = 9e-08
 Identities = 32/95 (33%), Positives = 50/95 (52%)
 Frame = +3

Query: 144 LNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSYVQHKRNEYLAE 323
           LNKY     G  +G+ +    N   +RP  SG  +HIIA+    SI  ++    +  LAE
Sbjct: 17  LNKYTWMCAG--YGLASSFVNNGLLRRPFLSGGHRHIIASIIGGSIGYFIGRFESRALAE 74

Query: 324 KDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
           ++     Y+  HP+DF     KK+G++ + W+PVR
Sbjct: 75  REFYIEEYVNRHPEDFSKETPKKLGEVTQRWLPVR 109


>UniRef50_O95298 Cluster: NADH dehydrogenase [ubiquinone] 1 subunit
           C2; n=16; Amniota|Rep: NADH dehydrogenase [ubiquinone] 1
           subunit C2 - Homo sapiens (Human)
          Length = 119

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = +3

Query: 78  MSLHMSAQELLKLGDEGRQKPFLNKYWPEIIGVTF-GIGTGMFLNFQTKRPVFS-GIQKH 251
           M    + + L  L DE R  P      P ++ + F G  +G+  N   +RP+ + G+ + 
Sbjct: 1   MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ 60

Query: 252 IIATGGWVSILSYVQHKRNEYL-AEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
           ++    +     Y   KR +YL A +D     Y++LHP+DFP  ++K  G++FE + P+R
Sbjct: 61  LLYITAFF-FAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR 119


>UniRef50_UPI00005169FC Cluster: PREDICTED: hypothetical protein
           isoform 2; n=1; Apis mellifera|Rep: PREDICTED:
           hypothetical protein isoform 2 - Apis mellifera
          Length = 122

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +3

Query: 318 AEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
           A KDA+ R YI  HP+ FP PE KK  ++ EPW P R
Sbjct: 86  ARKDAMMRDYIIRHPEYFPKPEYKKYANILEPWTPCR 122


>UniRef50_Q5BJK4 Cluster: Zgc:110155; n=2; Euteleostomi|Rep:
           Zgc:110155 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 110

 Score = 38.3 bits (85), Expect = 0.10
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +3

Query: 183 GIGTGMFLNFQTKRPVF-SGIQKHIIA-TGGWVSILSYVQHKRNEYLAEKDAVYRHYIEL 356
           G    +  N   +RP   +G+ + ++  T GW       ++++ +Y A+ D     YI  
Sbjct: 28  GWANAVLHNSVNRRPALKAGVHRQVLCITIGWFIGYHLTKYEKFKY-AKLDRDMSEYIRH 86

Query: 357 HPDDFPVPERKKIGDLFEPWIPVR 428
           HP++F   ERK   ++ EP+  +R
Sbjct: 87  HPNEFEQKERKTFAEIVEPFHAIR 110


>UniRef50_Q9BL33 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 139

 Score = 36.7 bits (81), Expect = 0.31
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +3

Query: 207 NFQTKRPVFSGIQKHIIATGGWVSILSYVQHKRNEYLAEKDAVYRHYIELHPDDFP-VPE 383
           N   K+P +  I   ++  G   +        R  +   +DAV  HY++LHP+DF    +
Sbjct: 56  NRWNKKPYYYAIVPRLLLIGAATAAGYAAGALRERHYQTRDAVIEHYMKLHPEDFDHFND 115

Query: 384 R--KKIGDLFEPWIPVR 428
           R  +    +  PW P R
Sbjct: 116 RSGRSFSQVLLPWYPRR 132


>UniRef50_Q8NVW6 Cluster: BsaB protein; n=7; Staphylococcus
           aureus|Rep: BsaB protein - Staphylococcus aureus (strain
           MW2)
          Length = 997

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 159 PEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWV-SILSYVQHKRNEYLAEKDAV 335
           P   G+  GI  G F+N  T+  V + IQK++   G W+  ++SY++   +EY      +
Sbjct: 88  PTPFGLLSGINLGHFVNEPTRLKVGNSIQKYVKVDGEWLYKLVSYIE-SIDEYYQNLKVI 146

Query: 336 YRHYIELHPDDFPVPERKKI 395
           +     +  D   + E+  I
Sbjct: 147 WNSKAHIINDRIYLNEQSAI 166


>UniRef50_A5BRX9 Cluster: Putative uncharacterized protein; n=9;
           core eudicotyledons|Rep: Putative uncharacterized
           protein - Vitis vinifera (Grape)
          Length = 1194

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
 Frame = +3

Query: 174 VTFGIGTGMFLNFQTK---RPV--FSGIQKHIIATGGWVSILSYVQHKRNEYLAEKDAVY 338
           VTF I +     F+ K   +P+   S +Q   +   G    L+YV ++ N    E   + 
Sbjct: 308 VTFNIPSRPDFGFEGKHVDKPLHMISALQASSLLRKGCQGFLAYVMNEENNLKLEDIPIV 367

Query: 339 RHYIELHPDDFP-VPERKKI 395
           R Y ++ PDD P +P  K++
Sbjct: 368 RDYPDVFPDDLPGLPPEKEV 387


>UniRef50_A2E821 Cluster: B-box zinc finger family protein; n=1;
           Trichomonas vaginalis G3|Rep: B-box zinc finger family
           protein - Trichomonas vaginalis G3
          Length = 663

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -1

Query: 470 FLTFHNNSIFNLHLT--NWDPRFKQV 399
           F+ FH N + NLHL    WDP+F++V
Sbjct: 152 FVVFHQNQVKNLHLVKFTWDPKFEKV 177


>UniRef50_Q5ZTP6 Cluster: Hypothetical phage AbiD protein; n=1;
           Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1|Rep: Hypothetical phage AbiD protein -
           Legionella pneumophila subsp. pneumophila (strain
           Philadelphia 1 /ATCC 33152 / DSM 7513)
          Length = 317

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 135 KPFLNKYWPEIIGVTFGIGTGMFLNFQTK---RPVFSGIQKHIIATGGWVSILSYVQH 299
           KP+    W  +  ++FG+ + MF N Q+K     + S + +H      W+  L+Y ++
Sbjct: 172 KPYFPPIWMMVEALSFGVCSKMFNNIQSKDVRNEIASFLGQHTTVIESWIKSLTYTRN 229


>UniRef50_A5B471 Cluster: Putative uncharacterized protein; n=1; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1416

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 156  WPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGW 272
            W ++IGV +G+  G + + + + P  +G+ K I+   GW
Sbjct: 1265 WKKVIGVKYGLEGGGWKSKEARGPFGAGVWKEILKEMGW 1303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,424,990
Number of Sequences: 1657284
Number of extensions: 9453028
Number of successful extensions: 23785
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23783
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)