Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j18
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119127-1|AAM50987.1|  116|Drosophila melanogaster RE29623p pro...   116   2e-26
AE014134-560|AAF51143.1|  116|Drosophila melanogaster CG12400-PA...   116   2e-26
U08103-1|AAA19603.1|  539|Drosophila melanogaster Peanut protein.      31   0.91 
AY058663-1|AAL13892.1|  539|Drosophila melanogaster LD37170p pro...    31   0.91 
AE013599-619|AAF59112.1|  539|Drosophila melanogaster CG8705-PB,...    31   0.91 
AE013599-618|AAM68857.1|  539|Drosophila melanogaster CG8705-PA,...    31   0.91 

>AY119127-1|AAM50987.1|  116|Drosophila melanogaster RE29623p
           protein.
          Length = 116

 Score =  116 bits (279), Expect = 2e-26
 Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +3

Query: 114 LGDEGRQKP-FLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSY 290
           L ++G  +P FL+  W  I     G+G  +F+N+  ++PVFSGIQKHI      V   +Y
Sbjct: 11  LTNKGTHEPSFLSPIWNPIACGVAGVGAAIFINWGFRKPVFSGIQKHIAFGAIGVGAGAY 70

Query: 291 VQHKRNEYLAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
              KRNEYLA++DAV RHYIELHPDDFPV ERK  G + E W+PVR
Sbjct: 71  FDQKRNEYLAKRDAVLRHYIELHPDDFPVKERKTYGQVLESWVPVR 116


>AE014134-560|AAF51143.1|  116|Drosophila melanogaster CG12400-PA
           protein.
          Length = 116

 Score =  116 bits (279), Expect = 2e-26
 Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +3

Query: 114 LGDEGRQKP-FLNKYWPEIIGVTFGIGTGMFLNFQTKRPVFSGIQKHIIATGGWVSILSY 290
           L ++G  +P FL+  W  I     G+G  +F+N+  ++PVFSGIQKHI      V   +Y
Sbjct: 11  LTNKGTHEPSFLSPIWNPIACGVAGVGAAIFINWGFRKPVFSGIQKHIAFGAIGVGAGAY 70

Query: 291 VQHKRNEYLAEKDAVYRHYIELHPDDFPVPERKKIGDLFEPWIPVR 428
              KRNEYLA++DAV RHYIELHPDDFPV ERK  G + E W+PVR
Sbjct: 71  FDQKRNEYLAKRDAVLRHYIELHPDDFPVKERKTYGQVLESWVPVR 116


>U08103-1|AAA19603.1|  539|Drosophila melanogaster Peanut protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 270 WVSILSYVQHKRNEYLAEKDAVYRHYI 350
           WV IL YV  K  EYL  +  VYR  I
Sbjct: 220 WVPILEYVDSKYEEYLTAESRVYRKTI 246


>AY058663-1|AAL13892.1|  539|Drosophila melanogaster LD37170p
           protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 270 WVSILSYVQHKRNEYLAEKDAVYRHYI 350
           WV IL YV  K  EYL  +  VYR  I
Sbjct: 220 WVPILEYVDSKYEEYLTAESRVYRKTI 246


>AE013599-619|AAF59112.1|  539|Drosophila melanogaster CG8705-PB,
           isoform B protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 270 WVSILSYVQHKRNEYLAEKDAVYRHYI 350
           WV IL YV  K  EYL  +  VYR  I
Sbjct: 220 WVPILEYVDSKYEEYLTAESRVYRKTI 246


>AE013599-618|AAM68857.1|  539|Drosophila melanogaster CG8705-PA,
           isoform A protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 270 WVSILSYVQHKRNEYLAEKDAVYRHYI 350
           WV IL YV  K  EYL  +  VYR  I
Sbjct: 220 WVPILEYVDSKYEEYLTAESRVYRKTI 246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,512,579
Number of Sequences: 53049
Number of extensions: 440698
Number of successful extensions: 985
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)