Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j17
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 196 PYRIALAPQRGFRTTAPSAL 255
           P    L+P  GFR+  PSAL
Sbjct: 191 PSMYPLSPGAGFRSPYPSAL 210


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 196 PYRIALAPQRGFRTTAPSAL 255
           P    L+P  GFR+  PSAL
Sbjct: 83  PSMYPLSPGAGFRSPYPSAL 102


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 345 IKVSGCFPVYGTVAVDGNMPSSGKAVINTGGGF 443
           + +SG F  +GT  +     +S K ++NT   F
Sbjct: 368 VSLSGTFGFFGTHILSYINKASFKKIVNTVATF 400


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 5   VLLWYQHRNGVWRGIGRDFSTNTGY 79
           VL  Y   + + R +G D  T TGY
Sbjct: 55  VLRLYPSVHYISRELGEDMVTTTGY 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,583
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)