Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j17
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    29   0.11 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.20 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.46 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   1.4  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    25   2.5  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   3.2  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    24   4.3  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   7.5  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   7.5  
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    23   7.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.9  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 132  PYGSSLYIPTVATGNGQATVTSLPNCFSPATGFPD 236
            P+  SL  PT+     +A+ T+ P+ F   TG+P+
Sbjct: 1096 PFHYSLKTPTLMKFEFEASATTYPSIFKTPTGYPE 1130


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
 Frame = +2

Query: 29   NGVWRGIGRDFSTNTGYPKFADVRERLPRVELVQPLRL-------IPLHSH----SSDRE 175
            N +W+G+ R      GY   A  R  +P + + Q L         +P H H    S D++
Sbjct: 1140 NTIWKGV-RWLMDVIGY---ARDRANMPELNMKQILDYKAAYFGKLPKHQHQQQASDDQK 1195

Query: 176  RPGHGHLLTELL*PRNGVSGLRPRPH*PSDAPGHRDRAFSAVR*HFGHRGHADRRHDKSE 355
            + G     T+LL P     G  P     S +PG       AV    GH G  D  H KSE
Sbjct: 1196 KKGGSE--TQLLHP----PGTAPNSFHKS-SPGRGSWPGPAVENTLGHNGLLDAEHSKSE 1248


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 147 LYIPTVATGNGQATVTSLPNCFSPATG 227
           L IP+VA G G   + + PN  +P++G
Sbjct: 136 LGIPSVAHGGGSGAIHASPNAQNPSSG 162


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 448 VTKPPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPP-IGMSPVTEMSP 302
           ++ PPP  M   P  GM+P     P     P   + PP +GM P   M P
Sbjct: 76  ISIPPPT-MNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVP 124


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +3

Query: 336 GGTIKVSGCFPVYG---TVAVDGNMPSSG 413
           GG++ V GCF  YG    V + GN+   G
Sbjct: 100 GGSLMVWGCFSYYGMGPLVRIHGNLNRFG 128


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 399 CYHRRRPCRKPGSNRSLLSCRLSA 328
           CY R R C      R+LLSC   A
Sbjct: 342 CYERPRFCGDSIPQRALLSCAFGA 365


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 107 LPRVELVQPLRLIPLHSHSSDRERPGH-GHLLTELL*PRNGVS 232
           L  V+++   +L   HS  SDRE  GH  H  T  L   +G S
Sbjct: 105 LSLVDMIPEEKLRGRHSSESDREGMGHDSHKRTHRLSDSDGGS 147


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +1

Query: 94  CPGTAASG-RTCTALTAHPSTFPQ*RPGTARPRSPP 198
           C G  AS    C     HP+T  + RPG   P + P
Sbjct: 295 CEGREASFVHNCFEGETHPTTQNKPRPGIVAPTTIP 330


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 425 KYWRRFRHSIHRSFMWMWTS 484
           K WR  RH I  S ++  TS
Sbjct: 300 KLWRGLRHEIKHSSLYQQTS 319


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 285 VPSLQFGDISVTGDMPIGGTIKVSGCFPVYGTVAVDGNMPSSG 413
           +PS  FG     G +P  G  +    FP +G     GN P  G
Sbjct: 128 IPS--FGSGQQNGGVPFLGNGQGQSGFPSFGNGQQGGNFPFFG 168


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 80   PKFADVRERLPRVELVQPLRLIPLHSH 160
            P+FA+VR++L    +  P+R   L  H
Sbjct: 959  PRFAEVRQQLLGEGITDPVRPENLQQH 985


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 93   MSGNGCLGSNLYSPYG 140
            +  NG L  NLYSP G
Sbjct: 1494 LCNNGLLKQNLYSPTG 1509


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 288 PSLQFGDISVTGDMPIGGTIKVSGCFPVYGTVAVDGNMPSSG 413
           P  + GDI +TG   + G   V G   V G   V G+  ++G
Sbjct: 353 PQGEKGDIGLTGVNGLPGLNGVKGDMGVPGFPGVKGDKGTTG 394


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,844
Number of Sequences: 2352
Number of extensions: 16031
Number of successful extensions: 29
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)