Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j17
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein. 32 1.3
AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif prote... 32 1.3
AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif prote... 32 1.3
AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif prote... 32 1.3
AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein. 32 1.3
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 31 2.3
CR450293-1|CAG29289.1| 179|Homo sapiens TCF21 protein. 31 3.1
BT019660-1|AAV38466.1| 179|Homo sapiens transcription factor 21... 31 3.1
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 31 3.1
BC025697-1|AAH25697.1| 179|Homo sapiens transcription factor 21... 31 3.1
AL356109-1|CAC26822.1| 179|Homo sapiens transcription factor 21... 31 3.1
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 31 3.1
AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 31 3.1
AF047419-1|AAC62532.1| 179|Homo sapiens epicardin protein. 31 3.1
AF035718-1|AAC62514.1| 179|Homo sapiens mesoderm-specific basic... 31 3.1
X83228-1|CAA58231.1| 832|Homo sapiens LI-cadherin protein. 31 4.1
U07969-1|AAA19021.1| 832|Homo sapiens intestinal peptide-associ... 31 4.1
BC113464-1|AAI13465.1| 832|Homo sapiens cadherin 17, LI cadheri... 31 4.1
BC112013-1|AAI12014.1| 832|Homo sapiens cadherin 17, precursor ... 31 4.1
AL583839-9|CAI12345.2| 1013|Homo sapiens WNK lysine deficient pr... 30 7.2
AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient pr... 30 7.2
AL583839-7|CAO03350.1| 2219|Homo sapiens WNK lysine deficient pr... 30 7.2
AL583839-6|CAI12344.3| 2297|Homo sapiens WNK lysine deficient pr... 30 7.2
AL390760-5|CAH73070.2| 1013|Homo sapiens WNK lysine deficient pr... 30 7.2
AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient pr... 30 7.2
AL390760-3|CAO03647.1| 2219|Homo sapiens WNK lysine deficient pr... 30 7.2
AL390760-1|CAH73069.3| 2297|Homo sapiens WNK lysine deficient pr... 30 7.2
AL354991-5|CAI14450.2| 1013|Homo sapiens WNK lysine deficient pr... 30 7.2
AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient pr... 30 7.2
AL354991-3|CAO03639.1| 2219|Homo sapiens WNK lysine deficient pr... 30 7.2
AL354991-2|CAI14449.3| 2297|Homo sapiens WNK lysine deficient pr... 30 7.2
AJ242724-1|CAB44308.5| 2297|Homo sapiens putative mitogen-activa... 30 7.2
AB051547-1|BAB21851.2| 2219|Homo sapiens KIAA1760 protein protein. 30 7.2
Z11892-1|CAA77946.1| 125|Homo sapiens immunoglobulin kappa chai... 29 9.5
U03484-1|AAD12550.1| 109|Homo sapiens immunoglobulin kappa chai... 29 9.5
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 29 9.5
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 29 9.5
>BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein.
Length = 1271
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 439 PPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPPIGMSPV 317
PPPV M +P +P+ + VP P++ VPP G SP+
Sbjct: 635 PPPVAMLQIPVAPAVPTVSLVP--PAFPVSMPVPPPGFSPI 673
>AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif protein
16 protein.
Length = 1271
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 439 PPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPPIGMSPV 317
PPPV M +P +P+ + VP P++ VPP G SP+
Sbjct: 635 PPPVAMLQIPVAPAVPTVSLVP--PAFPVSMPVPPPGFSPI 673
>AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif protein
16 protein.
Length = 1271
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 439 PPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPPIGMSPV 317
PPPV M +P +P+ + VP P++ VPP G SP+
Sbjct: 635 PPPVAMLQIPVAPAVPTVSLVP--PAFPVSMPVPPPGFSPI 673
>AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif protein
16 protein.
Length = 1271
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 439 PPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPPIGMSPV 317
PPPV M +P +P+ + VP P++ VPP G SP+
Sbjct: 635 PPPVAMLQIPVAPAVPTVSLVP--PAFPVSMPVPPPGFSPI 673
>AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein.
Length = 1330
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 439 PPPVFMTALPEDGMLPSTATVP*TGKQPLTFIVPPIGMSPV 317
PPPV M +P +P+ + VP P++ VPP G SP+
Sbjct: 694 PPPVAMLQIPVAPAVPTVSLVP--PAFPVSMPVPPPGFSPI 732
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.5 bits (68), Expect = 2.3
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 97 PGTAASGRTCTALTAHPSTFPQ*RPGTARPRSPPYRIALAPQRGFRTTAPSALTK*RPWS 276
P T+ + T+ T+ P+T P T+ P +P LAP T+AP+ T P S
Sbjct: 43 PTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTS-TTSAPTTSTTSTPTS 101
Query: 277 PRSCLLCSSVTFRS 318
+ +S T S
Sbjct: 102 STTSTPQTSTTSAS 115
>CR450293-1|CAG29289.1| 179|Homo sapiens TCF21 protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQV 79
>BT019660-1|AAV38466.1| 179|Homo sapiens transcription factor 21
protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQV 79
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 31.1 bits (67), Expect = 3.1
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = -3
Query: 445 TKPPPVFMTALPEDGMLPS-TATVP*TGKQP------LTFIVPPIGMSP 320
T PPPV +LP M P+ ATVP G P L VPP GM P
Sbjct: 360 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPP 408
>BC025697-1|AAH25697.1| 179|Homo sapiens transcription factor 21
protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQV 79
>AL356109-1|CAC26822.1| 179|Homo sapiens transcription factor 21
protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQV 79
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 264 TPLVTEIVPSLQFGDISVTGDMPIGGTIKVSGCFPVYGTVAVDGNMPSSG 413
TP + +P+ G + +P GT+ SG P GTV G +PS G
Sbjct: 213 TPYSRDTLPAT--GTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPG 260
>AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ33731 fis, clone BRAWH2017685, moderately
similar to Mus musculus mRNA for nuclear protein ZAP. ).
Length = 723
Score = 31.1 bits (67), Expect = 3.1
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = -3
Query: 445 TKPPPVFMTALPEDGMLPS-TATVP*TGKQP------LTFIVPPIGMSP 320
T PPPV +LP M P+ ATVP G P L VPP GM P
Sbjct: 101 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPP 149
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 31.1 bits (67), Expect = 3.1
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = -3
Query: 445 TKPPPVFMTALPEDGMLPS-TATVP*TGKQP------LTFIVPPIGMSP 320
T PPPV +LP M P+ ATVP G P L VPP GM P
Sbjct: 158 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPP 206
>AF047419-1|AAC62532.1| 179|Homo sapiens epicardin protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQV 79
>AF035718-1|AAC62514.1| 179|Homo sapiens mesoderm-specific
basic-helix-loop-helix protein protein.
Length = 179
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 316 TEMSPNCREGTISVTRGVTWLVRTGP*SGNPVAGLKQFGKEV 191
TE S NC G+ RG R P +P++G+ Q GK+V
Sbjct: 38 TEESSNCENGSPQKGRGGLGKRRRAPTKKSPLSGVSQEGKQV 79
>X83228-1|CAA58231.1| 832|Homo sapiens LI-cadherin protein.
Length = 832
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 69 IQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSL 200
++GI+SLP++ C+ + + P G IPTV G T L
Sbjct: 754 LEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLL 797
>U07969-1|AAA19021.1| 832|Homo sapiens intestinal
peptide-associated transporter HPT-1 protein.
Length = 832
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 69 IQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSL 200
++GI+SLP++ C+ + + P G IPTV G T L
Sbjct: 754 LEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLL 797
>BC113464-1|AAI13465.1| 832|Homo sapiens cadherin 17, LI cadherin
(liver-intestine) protein.
Length = 832
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 69 IQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSL 200
++GI+SLP++ C+ + + P G IPTV G T L
Sbjct: 754 LEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLL 797
>BC112013-1|AAI12014.1| 832|Homo sapiens cadherin 17, precursor
protein.
Length = 832
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 69 IQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSL 200
++GI+SLP++ C+ + + P G IPTV G T L
Sbjct: 754 LEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLL 797
>AL583839-9|CAI12345.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 185 PPV--TALPQDGAAPATSTMP 203
>AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 992 PPV--TALPQDGAAPATSTMP 1010
>AL583839-7|CAO03350.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1384 PPV--TALPQDGAAPATSTMP 1402
>AL583839-6|CAI12344.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1426 PPV--TALPQDGAAPATSTMP 1444
>AL390760-5|CAH73070.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 185 PPV--TALPQDGAAPATSTMP 203
>AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 992 PPV--TALPQDGAAPATSTMP 1010
>AL390760-3|CAO03647.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1384 PPV--TALPQDGAAPATSTMP 1402
>AL390760-1|CAH73069.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1426 PPV--TALPQDGAAPATSTMP 1444
>AL354991-5|CAI14450.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 185 PPV--TALPQDGAAPATSTMP 203
>AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 992 PPV--TALPQDGAAPATSTMP 1010
>AL354991-3|CAO03639.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1384 PPV--TALPQDGAAPATSTMP 1402
>AL354991-2|CAI14449.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1426 PPV--TALPQDGAAPATSTMP 1444
>AJ242724-1|CAB44308.5| 2297|Homo sapiens putative mitogen-activated
protein kinase kinase kinase protein.
Length = 2297
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1426 PPV--TALPQDGAAPATSTMP 1444
>AB051547-1|BAB21851.2| 2219|Homo sapiens KIAA1760 protein protein.
Length = 2219
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 436 PPVFMTALPEDGMLPSTATVP 374
PPV TALP+DG P+T+T+P
Sbjct: 1384 PPV--TALPQDGAAPATSTMP 1402
>Z11892-1|CAA77946.1| 125|Homo sapiens immunoglobulin kappa chain
(VJ) protein.
Length = 125
Score = 29.5 bits (63), Expect = 9.5
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +3
Query: 54 VILVLIQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSLPNCFSPATGFP 233
++L G LSL G G S S Y S Y+ GQA + S ATG P
Sbjct: 18 IVLTQSPGTLSLS-PGEGATLSCRASQYFGSNYLAWYQQKPGQAPRLLVYGASSRATGIP 76
Query: 234 D--YGPVRTNQVTPLVTEIVP 290
D G V T +T + P
Sbjct: 77 DRFIGSVSVTDFTLTITRLEP 97
>U03484-1|AAD12550.1| 109|Homo sapiens immunoglobulin kappa chain V
region protein.
Length = 109
Score = 29.5 bits (63), Expect = 9.5
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +3
Query: 54 VILVLIQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSLPNCFSPATGFP 233
++L G LSL G G S S Y S Y+ GQA + S ATG P
Sbjct: 2 IVLTQSPGTLSLS-PGEGATLSCRASQYFGSNYLAWYQQKPGQAPRLLVYGASSRATGIP 60
Query: 234 D--YGPVRTNQVTPLVTEIVP 290
D G V T +T + P
Sbjct: 61 DRFIGSVSVTDFTLTITRLEP 81
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 29.5 bits (63), Expect = 9.5
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +2
Query: 155 SHSSD-RERPGHGHLLTELL*PRNGVSGLRPRPH*PSDAPGHRDRAFSAVR*HFGHRGHA 331
SHSS RPGH L +GV R H P + D+A S+ H H
Sbjct: 25 SHSSPPHHRPGHSRALHHYELHHHGVPHQRGESHHPPEFQDFHDQALSS-HVHQSHHHSE 83
Query: 332 DRRHDKS 352
R H ++
Sbjct: 84 ARNHGRA 90
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 29.5 bits (63), Expect = 9.5
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +2
Query: 155 SHSSD-RERPGHGHLLTELL*PRNGVSGLRPRPH*PSDAPGHRDRAFSAVR*HFGHRGHA 331
SHSS RPGH L +GV R H P + D+A S+ H H
Sbjct: 25 SHSSPPHHRPGHSRALHHYELHHHGVPHQRGESHHPPEFQDFHDQALSS-HVHQSHHHSE 83
Query: 332 DRRHDKS 352
R H ++
Sbjct: 84 ARNHGRA 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,819,800
Number of Sequences: 237096
Number of extensions: 2436274
Number of successful extensions: 5702
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5690
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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