Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j17
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g29380.1 68414.m03592 hypothetical protein 30 1.0
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 29 3.1
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 29 3.1
At2g45340.1 68415.m05642 leucine-rich repeat transmembrane prote... 28 4.1
At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2... 28 4.1
At1g74790.1 68414.m08665 expressed protein contains similarity t... 28 4.1
At5g64440.1 68418.m08095 amidase family protein low similarity t... 28 5.4
At5g18610.1 68418.m02203 protein kinase family protein contains ... 28 5.4
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 28 5.4
At2g03200.1 68415.m00273 aspartyl protease family protein contai... 28 5.4
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 27 9.5
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote... 27 9.5
>At1g29380.1 68414.m03592 hypothetical protein
Length = 228
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 264 TPLVTE-IVPSLQF-GDISVTGDMP-IGGTIKVSGCFPVYGTVAVDGNMPSSGKAVINTG 434
TP +T+ PSL F G + TG P + GT G P+YGT P G V G
Sbjct: 51 TPTITQPSPPSLTFPGPTTPTGGYPPLDGTTPTGGYPPLYGTT------PPGGGDVGGGG 104
Query: 435 GGF 443
GG+
Sbjct: 105 GGY 107
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 PYGSSLYIPTVATGNGQATVTSLPNCFSPATGFPDYGPVRTNQVTP-LVTEIVPS 293
PY S Y+P V+ Q +P+ PA P + P T+ P + T VPS
Sbjct: 825 PYTDSYYVPQVSHPPMQQPTMFMPHQAQPAPQ-PSFTPAPTSNAQPSMRTTFVPS 878
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 PYGSSLYIPTVATGNGQATVTSLPNCFSPATGFPDYGPVRTNQVTP-LVTEIVPS 293
PY S Y+P V+ Q +P+ PA P + P T+ P + T VPS
Sbjct: 827 PYTDSYYVPQVSHPPMQQPTMFMPHQAQPAPQ-PSFTPAPTSNAQPSMRTTFVPS 880
>At2g45340.1 68415.m05642 leucine-rich repeat transmembrane protein
kinase, putative
Length = 691
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 92 DVRERLPRVELVQPLRLIPLHSHSSDRERPGHGHLLTEL 208
++R+ P VE Q RL L +H S +RP ++ EL
Sbjct: 646 NLRKNFPEVEAAQLARLGLLCTHESSNQRPSMEDVIQEL 684
>At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 783
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Frame = -2
Query: 404 RHVTIDGDRAVNREATAHFYRAAYRHVPC------DRNVTELQRRHDLGDQGRHLVS 252
+H IDG + E R RH PC DRN+T Q+ H D +H+ +
Sbjct: 559 KHQRIDGKTTNDGELFRQMNRNVLRHGPCSIGIFVDRNITGFQQPHGF-DSVQHVAT 614
>At1g74790.1 68414.m08665 expressed protein contains similarity to
hedgehog-interacting protein GI:4868122 from [Mus
musculus]
Length = 695
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 336 GGTIKVSGCFPVYGTVAVD-GNMPSSGKAVINTGGGFVTQYIDPSCGCGR 482
GG V P++ + + + SSGK+ TGG F DP C GR
Sbjct: 509 GGNTSVKSLNPIFPVMGYNHSEVDSSGKSASITGGYFYRSETDP-CIAGR 557
>At5g64440.1 68418.m08095 amidase family protein low similarity to
enantiomerase-selective amidase [Rhodococcus sp.]
GI:152052; contains Pfam profile PF01425: Amidase
Length = 607
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +3
Query: 81 LSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSLPNCFSPATGFPDYGPVRTNQ 260
L + +GN +P+ Y T + +G A + + C S A G G VR
Sbjct: 254 LGMGTTGNNSNYGTTRNPHDPKRY--TGGSSSGSAAIVAAGLC-SAALGTDGGGSVRIPS 310
Query: 261 VTPLVTEIVPSLQFGDISVTGDMPIGGTIKVSG 359
+T + + +G +TG + GGT+++ G
Sbjct: 311 ALCGITGLKTT--YGRTDMTGSLCEGGTVEIIG 341
>At5g18610.1 68418.m02203 protein kinase family protein contains
eukaryotic protein kinase domain, PROSITE:PS00107
Length = 513
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 351 VSGCFPVYGTVAVDGNMPSSGKAVINTGGGFVTQ 452
+SGC P +G+ A D S K ++ G VTQ
Sbjct: 1 MSGCLPCFGSSAKDAASKDSVKKELSAKDGSVTQ 34
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 142 HPSTFPQ*RPGT--ARPRSPPYRIALAPQRGFRTTAPSALTK*RPWSPRS 285
H S + RP T RPR+P +R A+ R SA T RP +P +
Sbjct: 242 HESAATERRPQTPETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPET 291
>At2g03200.1 68415.m00273 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 461
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 383 DRAVNREATAHFYRAAYRHVPCDRNVTELQRRHDLGDQGRHLVSADGAV 237
DR + + +R + RHV +N+T++Q+ ++G H ++ GAV
Sbjct: 33 DRTLPKNLPRSGFRLSLRHVDSGKNLTKIQKIQRGINRGFHRLNRLGAV 81
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 96 SGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSLPNC 209
SGN L +N +S GS + TV TGNG + + C
Sbjct: 129 SGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTC 166
>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 - Oryza sativa,
PIR:A57676
Length = 1010
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 42 GVLAVILVLIQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQAT---VTSLPNCF 212
G + + ++ IQ +L L MSGN +GS L G+ + T++ G+ + + +L NC
Sbjct: 471 GTIPLEIMKIQQLLRLDMSGNSLIGS-LPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCL 529
Query: 213 S 215
+
Sbjct: 530 T 530
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,207,844
Number of Sequences: 28952
Number of extensions: 330317
Number of successful extensions: 914
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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