Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j15
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 433 EKGSFFWNTPFKLEGNKYKLLFTY 362
           +KG  FW +PF +    +  + TY
Sbjct: 390 DKGDIFWFSPFLVANLAFVTIVTY 413


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 314 MLAKAQILYHIQCIKPGNSFGPYS 243
           +L+  + L+H +C KP   + P S
Sbjct: 25  VLSSDEELFHQKCPKPAPIYSPVS 48


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 3   LIKLIHKYNPTVFL 44
           ++  +HKY PTV L
Sbjct: 145 MLNSLHKYKPTVHL 158


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 366 VNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFV 515
           +N+N  L     K   +    +SK       + L   +K L  DS+Y+F+
Sbjct: 325 LNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFI 374


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 366 VNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFV 515
           +N+N  L     K   +    +SK       + L   +K L  DS+Y+F+
Sbjct: 217 LNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFI 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,375
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)