Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j15
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26446-1|AAA67690.1| 477|Homo sapiens protoporphyrinogen oxidas... 151 2e-36
D38537-1|BAA07538.1| 477|Homo sapiens protoporphyrinogen oxidas... 151 2e-36
BC002357-1|AAH02357.1| 477|Homo sapiens protoporphyrinogen oxid... 151 2e-36
AY032687-1|AAK50376.1| 205|Homo sapiens protoporphyrinogen oxid... 151 2e-36
AL590714-4|CAH72144.1| 477|Homo sapiens protoporphyrinogen oxid... 151 2e-36
AF215863-1|AAG43994.1| 44|Homo sapiens mutant protoporphyrinog... 42 0.002
>U26446-1|AAA67690.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 151 bits (366), Expect = 2e-36
Identities = 66/161 (40%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +3
Query: 168 EATNYCGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPA 344
E++ GGWI+S+R + +FE GPR IRP G G TL ++ +LGL + P++ DHPA
Sbjct: 34 ESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPA 93
Query: 345 ARNRMIYVNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERR 524
A+NR +YV L+ LP+ L+G+ + + PFSKPL +A +L KP + D+++++F +RR
Sbjct: 94 AQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRR 153
Query: 525 FGKEIADYAISPMICGICAGDAKEISVKFLMKTLFEWEQTH 647
G E+A A+ + G+ AG+++E+S++ +LF+ EQTH
Sbjct: 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194
>D38537-1|BAA07538.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 151 bits (366), Expect = 2e-36
Identities = 66/161 (40%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +3
Query: 168 EATNYCGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPA 344
E++ GGWI+S+R + +FE GPR IRP G G TL ++ +LGL + P++ DHPA
Sbjct: 34 ESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPA 93
Query: 345 ARNRMIYVNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERR 524
A+NR +YV L+ LP+ L+G+ + + PFSKPL +A +L KP + D+++++F +RR
Sbjct: 94 AQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRR 153
Query: 525 FGKEIADYAISPMICGICAGDAKEISVKFLMKTLFEWEQTH 647
G E+A A+ + G+ AG+++E+S++ +LF+ EQTH
Sbjct: 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194
>BC002357-1|AAH02357.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 151 bits (366), Expect = 2e-36
Identities = 66/161 (40%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +3
Query: 168 EATNYCGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPA 344
E++ GGWI+S+R + +FE GPR IRP G G TL ++ +LGL + P++ DHPA
Sbjct: 34 ESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPA 93
Query: 345 ARNRMIYVNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERR 524
A+NR +YV L+ LP+ L+G+ + + PFSKPL +A +L KP + D+++++F +RR
Sbjct: 94 AQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRR 153
Query: 525 FGKEIADYAISPMICGICAGDAKEISVKFLMKTLFEWEQTH 647
G E+A A+ + G+ AG+++E+S++ +LF+ EQTH
Sbjct: 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194
>AY032687-1|AAK50376.1| 205|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 205
Score = 151 bits (366), Expect = 2e-36
Identities = 66/161 (40%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +3
Query: 168 EATNYCGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPA 344
E++ GGWI+S+R + +FE GPR IRP G G TL ++ +LGL + P++ DHPA
Sbjct: 34 ESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPA 93
Query: 345 ARNRMIYVNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERR 524
A+NR +YV L+ LP+ L+G+ + + PFSKPL +A +L KP + D+++++F +RR
Sbjct: 94 AQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRR 153
Query: 525 FGKEIADYAISPMICGICAGDAKEISVKFLMKTLFEWEQTH 647
G E+A A+ + G+ AG+++E+S++ +LF+ EQTH
Sbjct: 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194
>AL590714-4|CAH72144.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 151 bits (366), Expect = 2e-36
Identities = 66/161 (40%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +3
Query: 168 EATNYCGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPA 344
E++ GGWI+S+R + +FE GPR IRP G G TL ++ +LGL + P++ DHPA
Sbjct: 34 ESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPA 93
Query: 345 ARNRMIYVNNNLYLLPSSLKGVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERR 524
A+NR +YV L+ LP+ L+G+ + + PFSKPL +A +L KP + D+++++F +RR
Sbjct: 94 AQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRR 153
Query: 525 FGKEIADYAISPMICGICAGDAKEISVKFLMKTLFEWEQTH 647
G E+A A+ + G+ AG+++E+S++ +LF+ EQTH
Sbjct: 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194
>AF215863-1|AAG43994.1| 44|Homo sapiens mutant protoporphyrinogen
oxidase protein.
Length = 44
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 405 GVFQKNEPFSKPLIYALYHDLKKPHKQLKDDSIYNFVERRFGKE 536
G+ + + PFSKPL +A +L KP + D+++++F +RR G E
Sbjct: 1 GLLRPSPPFSKPLFWAGLRELTKPPGKEPDETVHSFAQRRLGPE 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,988,895
Number of Sequences: 237096
Number of extensions: 1772697
Number of successful extensions: 3286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3281
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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