Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j14
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 309 NLNYWHWFL*TDFSWSVFVFSFEHFRRNVYFFFSSKQCL 193
           NL++WHW L   F  +  V +    RR   F++  +Q +
Sbjct: 204 NLHHWHWHLVYPFEAAREVVAKN--RRGELFYYMHQQII 240


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 309 NLNYWHWFL*TDFSWSVFVFSFEHFRRNVYFFFSSKQCL 193
           NL++WHW L   F  +  +   +  RR   F++  +Q +
Sbjct: 204 NLHHWHWHLVYPFEGAREI--VDKNRRGEIFYYMHQQII 240


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 612 VWLFALTELLFNIISILLCNFSVQLVSFACFMLI 511
           V  FAL+ELL ++ + +L   S  L+ F   + +
Sbjct: 55  VTFFALSELLTDLATSILLKVSSLLIGFCASIYV 88


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 584 FSISSLFFCATSLSNLFLLHALC 516
           F++  LF CA    N+ LL  LC
Sbjct: 176 FTMHLLFCCAFIFFNMHLLFLLC 198


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 223 NVPPKVFKRENKNRPR 270
           N+PP      +KNRPR
Sbjct: 239 NLPPGAIPVPDKNRPR 254


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -3

Query: 630 FRFVLEVWLFALTELLFNIISILLCNFSVQLVSFACF 520
           F F   ++LF +  + +++    + NF   L  F  F
Sbjct: 145 FVFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIF 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,564
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)