Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j14
(671 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 75 7e-15
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 34 0.021
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 29 0.61
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 1.1
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 28 1.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.4
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 27 1.9
SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy... 27 2.5
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 26 4.3
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 4.3
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 4.3
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 25 7.5
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 25 7.5
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 25 9.9
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 25 9.9
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 25 9.9
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 75.4 bits (177), Expect = 7e-15
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Frame = +1
Query: 256 KNRPREISSKKPVPVV-QVAHVKKKEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIK 432
K+ P+E+SSKKPV +V KK RDPRFD L G K + +NYGFL+E R+ +I+
Sbjct: 14 KHAPQELSSKKPVSRFREVISEPKKFTRDPRFDSLSGNLSKDKVKKNYGFLNEYRVSEIQ 73
Query: 433 AARQELRETTDPEKQIKXXXXXXXXNDQHKACKRNKLDREVAQKNRDDIEKQFREGKQPH 612
R EL+ D E+ + + + V + R +++ +EGK+P
Sbjct: 74 QLRDELKICKDQERAESIRQTLKSLLSKMERHLEEERAERVMHEFRAQEKERVKEGKKPF 133
Query: 613 FKNKSELRVEALVKQYESL 669
+ ++E + + +Y+S+
Sbjct: 134 YLKRNEQKKLIQMDKYKSM 152
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 EDNERT-SIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKVFKRENKNRPR 270
+D ER SIR L SL + + L+E+ +V E KE+V K F + + +
Sbjct: 83 KDQERAESIRQTLKSLLSKMERHLEEERAERVMHEFRAQEKERVKEGKKPFYLKRNEQKK 142
Query: 271 EISSKK 288
I K
Sbjct: 143 LIQMDK 148
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 33.9 bits (74), Expect = 0.021
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 88 EIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEA 198
E+++ ER S + ELA L E LQ L+EK+GA V+ A
Sbjct: 2396 ELQEAERKS-QQELADLVTESLQVLQEKVGATVFARA 2431
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 29.1 bits (62), Expect = 0.61
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +1
Query: 208 TKEKVNVPPKVFKRENKNRPREISSKKPVPVVQVAHVKKKEVRDPRFDPLCGEFDKKQFS 387
+K K NVP K+FK+ K IS K+ ++ KK V + + G++D S
Sbjct: 23 SKNKENVPGKLFKK-FKCPSLVISEKRK----ELPLRKKPRVNYSEYGSVDGKYDSAYVS 77
Query: 388 QNYGFLSELRMKDIKAARQELRE-TTDPEKQIKXXXXXXXXNDQHKAC 528
+N L+ ++ + E R+ +T +KQ D K C
Sbjct: 78 ENVSGLATIKEANRLILNHERRDPSTVIKKQFSVPKPIKGHEDISKLC 125
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/125 (19%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +1
Query: 85 DEIEDNERTSIRSELASLSFEELQQLKE--KIGAKVYKEALFGTKEKVNVPPKVFKRENK 258
+ I E ++ E E+ ++L+E KI AK KE KE++ + + +R +
Sbjct: 88 ERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQ--QRRKE 145
Query: 259 NRPREISSKKPVPVVQVAHVKKKEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIKAA 438
R +++ K+ ++ + KE + + + + +K+ + N F+++ + ++
Sbjct: 146 ERDQKLREKEEAQRLRQEQILNKERQQLKLNNFFTKGVEKRIAPNENFVAD-KTDELNEF 204
Query: 439 RQELR 453
+E R
Sbjct: 205 EKEFR 209
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 22 DLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKE 195
D I+Y LLK + + ++E+E +E +R L L LQ K I ++ K+
Sbjct: 347 DTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRSLGVL-LSRLQSKKLFISNEIQKQ 403
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 52 SCSEDNEDSHVD-EIEDNERTSIRSELASLSFEELQQLKEK 171
S EDN D E +D+ + S L FEEL+ L+EK
Sbjct: 38 SVDEDNTSVFEDVEAQDSRQKRFSSTLEGNRFEELRSLREK 78
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 22 DLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKE 195
DLI +L +M D + ++V D+E + + L LS E + K+ + KE
Sbjct: 237 DLIAQMLKQMLDQSDKDRAYVKIEGDDEVVLLMNNLGGLSMLEFSAISHKVKEALAKE 294
>SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 211
Score = 27.1 bits (57), Expect = 2.5
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 85 DEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKVFKRENKNR 264
DE+ E S+ AS S+E+L K E+LF + + V KR++KN
Sbjct: 130 DELLATEPISLSINPASTSYEKLTVSSPNSFLKNQDESLFLSSSPITVSQGT-KRKSKNS 188
Query: 265 PREISSKK 288
+ KK
Sbjct: 189 NSTVKKKK 196
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 316 VKKKEVRDPRFDPLCGEFDKKQFSQNYGFLS-ELRMKDIKAARQELRETTDP 468
V+KKE+++ +F+ E K+ + NY +S + K + + +E + +P
Sbjct: 220 VQKKEMKEKKFEKQLLELRKRTRTSNYSRMSIREKRKHVHSYDEEFEKPNEP 271
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 79 HVDEIEDNERTSIRSELASLSFEELQ 156
HV++ ED RT ++S+ A +S E+Q
Sbjct: 93 HVEDKEDLNRTVVKSQEAIVSIPEIQ 118
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 547 CPTC-FFCMLYADHSIFAIIYVILFVSL 467
C C FC+L+ + S+F I Y LF +L
Sbjct: 511 CEVCNSFCLLFDERSLFKIPYHELFCAL 538
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 178 AKVYKEALFGTKEKVNVPPKVFKRENKNRPREISSKKPVPVVQVAHVKKKEVRDPRFDPL 357
A+ Y++ G K V P F+R+ + E S ++ VP+V+ + V+K+E + +
Sbjct: 8 ARAYRQRKVGIK---TVMPIYFERDIPDFDEEASLQRTVPLVE-SGVEKEEEEEKHLQQV 63
Query: 358 CGE 366
E
Sbjct: 64 INE 66
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.4 bits (53), Expect = 7.5
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 61 EDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKV 240
E DSHVD IED + + + + E L+ L + ++ L +++V K
Sbjct: 21 ETEYDSHVDSIEDIHSLASKRKKLNEKKENLEDL-TLLKTSAFELKLNELIREISVRGKY 79
Query: 241 FKRENK--NRPREISSKKPV 294
F+ N + +++ K PV
Sbjct: 80 FRHANTFVEKIKDLIFKTPV 99
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +1
Query: 283 KKPVPVVQVAHVKKKEVRDPRFDPLCGEFD---KKQFSQNYGFLSELRMKDIKAAR 441
K P VQ +K DP+F + G D K + + F +E++ K AR
Sbjct: 405 KNPANDVQYISIKALNEYDPKFTNVTGSVDWRSKLESQRGAVFATEMKNNSCKLAR 460
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 79 HVDEIEDNERTSIRSELASLSFEELQQLKE 168
H+D++ +N+ T S + S +FE LQ + E
Sbjct: 295 HLDDLLENQSTGFFSMIDSSNFEGLQLVYE 324
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 40 LLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEK 219
+L + C D + IE+ +TS + ++FEE Q + +KIGA Y E E
Sbjct: 113 ILLVGCKVDLRNDP-KTIEELSKTSQKP----ITFEEGQVVAQKIGAYKYLECSAKLNEG 167
Query: 220 VN 225
VN
Sbjct: 168 VN 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,392,284
Number of Sequences: 5004
Number of extensions: 45391
Number of successful extensions: 165
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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