Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j10
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5UQW3 Cluster: Uncharacterized protein L374; n=1; Acan...    33   4.8  
UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC0197...    33   8.4  

>UniRef50_Q5UQW3 Cluster: Uncharacterized protein L374; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L374 - Mimivirus
          Length = 225

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 582 LQGHYTTTRPNHLFSTLELLH-----WMYEPNEYNEFWTLERKKEK 460
           L GH +T R +   + + LLH     W YE N +N  W L++ K +
Sbjct: 87  LMGHRSTYRRDEFINMMNLLHCQYEIWDYEDNYFNSNWNLKQLKNQ 132


>UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC01974
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to SJCHGC01974 protein - Ornithorhynchus
           anatinus
          Length = 438

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +3

Query: 420 SLYIYNIVF*LRNVFLSFFLMSKIH-YIRWVHTSSVVAPVLRTNDLVVLSYNGLVIDMIY 596
           S+YIY  ++   +VF+SF +   +H Y  ++     +   +  N  + + Y   +   +Y
Sbjct: 302 SVYIYIFLYIYPSVFISFCIYILLHIYPAYISFCIYILMYIYPNVYIYILY---IYPSVY 358

Query: 597 TYIYICLHL 623
            YI +C+H+
Sbjct: 359 IYILLCIHI 367


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,782,538
Number of Sequences: 1657284
Number of extensions: 12300305
Number of successful extensions: 27692
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27525
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)