Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j09
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal p... 152 1e-36
BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal... 152 1e-36
BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal... 152 1e-36
Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal p... 150 5e-36
Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal p... 147 3e-35
Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal p... 138 2e-32
Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal p... 124 5e-28
U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15 prot... 87 9e-17
BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal... 86 2e-16
CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein. 84 6e-16
AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated ant... 80 1e-14
AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens ... 56 1e-07
>Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 152 bits (369), Expect = 1e-36
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 245
Query: 736 KVVL 747
V+
Sbjct: 246 PAVV 249
>BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 152 bits (369), Expect = 1e-36
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGYYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 245
Query: 736 KVVL 747
V+
Sbjct: 246 PAVV 249
>BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 152 bits (369), Expect = 1e-36
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 245
Query: 736 KVVL 747
V+
Sbjct: 246 PAVV 249
>Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 240
Score = 150 bits (364), Expect = 5e-36
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 3/234 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLK 717
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQ 239
>Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 147 bits (357), Expect = 3e-35
Identities = 83/244 (34%), Positives = 129/244 (52%), Gaps = 3/244 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LK DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 245
Query: 736 KVVL 747
V+
Sbjct: 246 PAVV 249
>Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 218
Score = 138 bits (334), Expect = 2e-32
Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 3/207 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSK 636
+YK + + EE EW GLT EA+ K
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEK 214
>Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 194
Score = 124 bits (298), Expect = 5e-28
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 378
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 556 EYKTY 570
+YK +
Sbjct: 190 KYKEF 194
>U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15
protein.
Length = 128
Score = 86.6 bits (205), Expect = 9e-17
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S ++LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 117
Query: 736 KVVL 747
V+
Sbjct: 118 PAVV 121
>BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 128
Score = 85.8 bits (203), Expect = 2e-16
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +1
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQALSE 117
Query: 736 KVVL 747
V+
Sbjct: 118 PAVV 121
>CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein.
Length = 128
Score = 83.8 bits (198), Expect = 6e-16
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +1
Query: 379 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 555
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 556 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGIES 735
+YK + + EE EW GLT EA+ K L+E P+PL ++ L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIHVAELIQQLQQQALSE 117
Query: 736 KVVL 747
V+
Sbjct: 118 PAVV 121
>AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated
antigen recgonized by T lymphocytes ; P15 protein.
Length = 131
Score = 79.8 bits (188), Expect = 1e-14
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Frame = +1
Query: 379 RTISLINDHYGFDHYLLK---TPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQME 546
RT+ LI++ YG D Y+LK TP DL S + LK+ +L L P+ H DP+++
Sbjct: 2 RTLDLIDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAA 61
Query: 547 IYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAG 726
IY++YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+
Sbjct: 62 IYDKYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQA 117
Query: 727 IESKVVL 747
+ V+
Sbjct: 118 LSEPAVV 124
>AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ39525 fis, clone PUAEN2002758. ).
Length = 158
Score = 56.4 bits (130), Expect = 1e-07
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 25 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 204
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 205 KFPAEINEGIWGGEAVVKG 261
FP E G+WGGE + G
Sbjct: 70 YFPPESQRGLWGGEGWILG 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,521,185
Number of Sequences: 237096
Number of extensions: 2030658
Number of successful extensions: 8722
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8691
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -