Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j03
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p pro...   144   9e-35
AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-P...   144   9e-35
AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p pro...   120   1e-27
AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA...   120   1e-27
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro...    31   1.4  
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P...    31   1.4  
BT023135-1|AAY55551.1|  393|Drosophila melanogaster IP10846p pro...    30   2.4  
BT023075-1|AAY55491.1|  393|Drosophila melanogaster IP10946p pro...    30   2.4  
BT022987-1|AAY55403.1|  393|Drosophila melanogaster IP11146p pro...    30   2.4  
AY051964-1|AAK93388.1| 1266|Drosophila melanogaster LD43047p pro...    28   7.4  
AE014297-1339|AAG22146.2| 1266|Drosophila melanogaster CG14712-P...    28   7.4  
BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro...    28   9.7  
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P...    28   9.7  

>AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p
           protein.
          Length = 103

 Score =  144 bits (348), Expect = 9e-35
 Identities = 68/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +1

Query: 79  MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARK-ENGDF 255
           MA A+K+++P+LDR+LI+RAEA+TKT GGIV+PEKA  KVL G V+AVGPG R    G+ 
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNH 60

Query: 256 IPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 384
           IP+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 61  IPIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103


>AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-PA
           protein.
          Length = 103

 Score =  144 bits (348), Expect = 9e-35
 Identities = 68/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +1

Query: 79  MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARK-ENGDF 255
           MA A+K+++P+LDR+LI+RAEA+TKT GGIV+PEKA  KVL G V+AVGPG R    G+ 
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNH 60

Query: 256 IPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 384
           IP+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 61  IPIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103


>AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p
           protein.
          Length = 102

 Score =  120 bits (290), Expect = 1e-27
 Identities = 59/103 (57%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = +1

Query: 79  MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENG-DF 255
           M+N +K+++P+LDR+LI+R E  T TAGGI++PE++  K + G VVAVGPGAR   G   
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAGAGH 60

Query: 256 IPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 384
           + V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 61  LSVGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102


>AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA
           protein.
          Length = 102

 Score =  120 bits (290), Expect = 1e-27
 Identities = 59/103 (57%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = +1

Query: 79  MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENG-DF 255
           M+N +K+++P+LDR+LI+R E  T TAGGI++PE++  K + G VVAVGPGAR   G   
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAGAGH 60

Query: 256 IPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 384
           + V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 61  LSVGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102


>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
           protein.
          Length = 2201

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -1

Query: 317 TLVPPYSGRRTLSPTLT*TGMKSPFSFRAPGPTATTSPCKTLD*AFSGMTMPP 159
           T  P  +   TL+PT T T  ++P     P PT T++P  T     +G   PP
Sbjct: 36  TATPTPTATPTLTPTPTATRTRTPTPTLTPTPTPTSTPSSTA--IAAGQPAPP 86


>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
           isoform A protein.
          Length = 2529

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -1

Query: 317 TLVPPYSGRRTLSPTLT*TGMKSPFSFRAPGPTATTSPCKTLD*AFSGMTMPP 159
           T  P  +   TL+PT T T  ++P     P PT T++P  T     +G   PP
Sbjct: 364 TATPTPTATPTLTPTPTATRTRTPTPTLTPTPTPTSTPSSTA--IAAGQPAPP 414


>BT023135-1|AAY55551.1|  393|Drosophila melanogaster IP10846p
           protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -3

Query: 399 YHHSVFNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKKNFITHTNLNGDEVSIFFSGSRTD 220
           Y   V +F++YV+   E++     F    + +  W  N +   +  G+     FSG  T 
Sbjct: 221 YEDKVKSFQKYVKSGTEILDSKTSFNVILNGSC-WPNNLLLQVDAFGNVKDTLFSGFHTA 279

Query: 219 RYYFSV*NLGLSLL 178
           +Y  +V +L  SLL
Sbjct: 280 QYGPAVYDLFSSLL 293


>BT023075-1|AAY55491.1|  393|Drosophila melanogaster IP10946p
           protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -3

Query: 399 YHHSVFNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKKNFITHTNLNGDEVSIFFSGSRTD 220
           Y   V +F++YV+   E++     F    + +  W  N +   +  G+     FSG  T 
Sbjct: 221 YEDKVKSFQKYVKSGTEILDSKTSFNVILNGSC-WPNNLLLQVDAFGNVKDTLFSGFHTA 279

Query: 219 RYYFSV*NLGLSLL 178
           +Y  +V +L  SLL
Sbjct: 280 QYGPAVYDLFSSLL 293


>BT022987-1|AAY55403.1|  393|Drosophila melanogaster IP11146p
           protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -3

Query: 399 YHHSVFNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKKNFITHTNLNGDEVSIFFSGSRTD 220
           Y   V +F++YV+   E++     F    + +  W  N +   +  G+     FSG  T 
Sbjct: 221 YEDKVKSFQKYVKSGTEILDSKTSFNVILNGSC-WPNNLLLQVDAFGNVKDTLFSGFHTA 279

Query: 219 RYYFSV*NLGLSLL 178
           +Y  +V +L  SLL
Sbjct: 280 QYGPAVYDLFSSLL 293


>AY051964-1|AAK93388.1| 1266|Drosophila melanogaster LD43047p protein.
          Length = 1266

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -1

Query: 344  YSFSSFSRLTLVPPYSG---RRTLSPTLT*TGMKSPFSFRAPGPTATTSP 204
            +SFSS +  T  P + G       +PT T T    PF+F A  P A   P
Sbjct: 1086 FSFSS-NNPTPAPTFGGFGAPAAAAPTATSTNQSKPFAFGASTPAAAPQP 1134


>AE014297-1339|AAG22146.2| 1266|Drosophila melanogaster CG14712-PA
            protein.
          Length = 1266

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -1

Query: 344  YSFSSFSRLTLVPPYSG---RRTLSPTLT*TGMKSPFSFRAPGPTATTSP 204
            +SFSS +  T  P + G       +PT T T    PF+F A  P A   P
Sbjct: 1086 FSFSS-NNPTPAPTFGGFGAPAAAAPTATSTNQSKPFAFGASTPAAAPQP 1134


>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p
           protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 73  IEMANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSK 195
           + +  AV  +VP  D + I+RAE +    G +V+P++ + +
Sbjct: 245 VPLPGAVPEIVP--DPIAIQRAEELAAATGQVVLPKEEEEE 283


>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
           protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 73  IEMANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSK 195
           + +  AV  +VP  D + I+RAE +    G +V+P++ + +
Sbjct: 245 VPLPGAVPEIVP--DPIAIQRAEELAAATGQVVLPKEEEEE 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,421,890
Number of Sequences: 53049
Number of extensions: 396849
Number of successful extensions: 932
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)