Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j01
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 298 NDPSQYLWMNICSRNIS 248
           N   +Y W+N+C  N+S
Sbjct: 50  NTNRKYYWLNVCCLNLS 66


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +1

Query: 208 YQIFGSQVXQNKXAIYSCCIYSSKDI 285
           Y  FG  +      IYS C+ + K +
Sbjct: 118 YAFFGVHLAYGVVIIYSICVQTEKSV 143


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 520 IAIAFPSPKILNLNVFDKLLTVHTFEGL 603
           ++ +FP  K++   +F  + T+   EGL
Sbjct: 28  LSCSFPKKKLVYCIIFGAIATLTCIEGL 55


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 520 IAIAFPSPKILNLNVFDKLLTVHTFEGL 603
           ++ +FP  K++   +F  + T+   EGL
Sbjct: 24  LSCSFPKKKLVYCIIFGAIATLTCIEGL 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,124
Number of Sequences: 336
Number of extensions: 4221
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)