Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j01
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 38 0.006
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 36 0.025
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 34 0.10
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 34 0.10
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 33 0.23
SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15) 33 0.23
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 33 0.31
SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.53
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.53
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 30 2.2
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 2.8
SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14) 29 5.0
SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 29 5.0
SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34) 28 8.7
SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) 28 8.7
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 601 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
LL N +D L++ G +F+ HKAILAA S VF AMF
Sbjct: 216 LLDNATFSDTVLIA-GGREFKAHKAILAARSPVFSAMF 252
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 625 DFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
D L++EDG++ HK +L+A S+ F+AMF
Sbjct: 27 DVVLMTEDGQEIDAHKLVLSASSEYFRAMF 56
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 607 KNLEDADFTLVSEDGEKFRV--HKAILAAHSDVFKAMF 714
+ D +F++++ DGEK + HK +LA S VF+AMF
Sbjct: 22 RTFSDVEFSVMNADGEKVSIPAHKYVLATSSPVFEAMF 59
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 580 TVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
T FE KN + D +V D ++ R HK +LA+ SD F AMF
Sbjct: 20 TFMRFEDFRKNSQLCDIKIVIGD-KRIRAHKLVLASFSDYFSAMF 63
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 34.7 bits (76), Expect = 0.076
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
E D TL +EDG VH+ +LAA S F+AMF
Sbjct: 80 ELCDVTLETEDGLSIAVHRNVLAAVSPYFRAMF 112
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 526 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK 705
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 1 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 59
Query: 706 AMF 714
AMF
Sbjct: 60 AMF 62
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 526 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK 705
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 43 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 101
Query: 706 AMF 714
AMF
Sbjct: 102 AMF 104
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 646 DGEKFRVHKAILAAHSDVFKAMF 714
DG +F HK ILAA SD F AMF
Sbjct: 41 DGHEFPAHKNILAASSDYFMAMF 63
>SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15)
Length = 239
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
+++D LV E+ E F VHK IL S VFKAMF
Sbjct: 16 DESDVILVVEEQE-FHVHKFILKMASPVFKAMF 47
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 625 DFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
D TL + + F HK +LAA SD FKA+F
Sbjct: 30 DITLKTTSEDIFPAHKIVLAAKSDYFKALF 59
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 32.7 bits (71), Expect = 0.31
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +1
Query: 538 SPKILNLNVFDKLLTVHTFEGLL-KNLED-------ADFTLVSEDGEKFRVHKAILAAHS 693
+PK L+ N L+ EGLL K+L D D L+ E+ E+F HK ILAA+S
Sbjct: 10 APKSLSKNTHPTLM-----EGLLLKSLNDQRQSKILCDVVLLVEN-EEFSAHKGILAANS 63
Query: 694 DVFKAMF 714
F AMF
Sbjct: 64 HYFMAMF 70
>SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 607 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
K +D+D L E+ E F VHK IL S VFKAMF
Sbjct: 23 KPWDDSDIILEVEEQE-FYVHKMILKMASPVFKAMF 57
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 517 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSD 696
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 697 VFKAMF 714
F+AMF
Sbjct: 74 YFRAMF 79
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 517 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSD 696
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 697 VFKAMF 714
F+AMF
Sbjct: 74 YFRAMF 79
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 592 FEGLLKNLEDADFTLVSE--DGEKFRVHKAILAAHSDVFKAMF 714
+E L + LE DF V G++F H+AIL S F +MF
Sbjct: 77 YEFLRRTLESGDFADVCFVIHGQRFCAHRAILTTRSSYFASMF 119
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +1
Query: 583 VHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
++T + N E +D T V E GE F HK ILA S FK M
Sbjct: 477 IYTGADYVNNQEMSDVTFVVE-GEPFYGHKIILATASPRFKQM 518
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 DADFTLVSEDGE--KFRVHKAILAAHSDVFKAMF 714
D +F + DG +F HK +L+ S VF+AMF
Sbjct: 28 DIEFLITKADGTEVRFPAHKFVLSVSSPVFEAMF 61
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 607 KNLEDADFTLVSEDGEKFRV-HKAILAAHSDVFKAMF 714
K L D F + E G+ F HK ILA S VF AMF
Sbjct: 2758 KLLSDVSFRVGKEQGKYFIPGHKLILAISSPVFYAMF 2794
>SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 478 SNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLL 606
++L G + S+ +AIAF + LN+F L + T G+L
Sbjct: 460 ASLSAGTFSSMSISVAIAFVVMLLTTLNIFISLYAIITIVGIL 502
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 601 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
L ++ E D T + E KF H+ ILAA S+ F+A+
Sbjct: 25 LYQSRELTDVTFIVEK-TKFTAHRVILAARSEYFRAL 60
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 249 DIFLLHIFIQRYCEGSFSI 305
DIFLLHI I+R C +FS+
Sbjct: 281 DIFLLHINIERRCVNNFSL 299
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 607 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
+N ++ L+ D E+ HK +LAA S F+AMF
Sbjct: 27 RNSKELCDVLLCVDDEEIPSHKLVLAASSPYFRAMF 62
>SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14)
Length = 812
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = -2
Query: 622 HPPNF*VILQKYELLT-----IYQKHSDSVFSDWEMQWLCTGIYFS*IQHQD*RNXMCLH 458
HP N V+ QK L +Y H+ SV + LC G+Y + H++ R +
Sbjct: 462 HPHNSSVLCQKVVALLSLGLFVYHPHNSSVLCQKVVALLCLGLYPNVCMHREKRKVITTE 521
Query: 457 ILSNLALVH 431
ALVH
Sbjct: 522 --GKAALVH 528
>SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 DADFTLVSEDGE--KFRVHKAILAAHSDVFKAMF 714
D +F +V +GE K HK ILA S VF++ F
Sbjct: 25 DIEFAVVKSNGELDKIPAHKFILAIGSPVFESQF 58
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 637 VSEDGEKFRV--HKAILAAHSDVFKAMF 714
++ DGEK + HK +LA S VF+AMF
Sbjct: 1 MNADGEKVSIPAHKYVLATSSPVFEAMF 28
>SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34)
Length = 438
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 707 ALNTSLCAARMALCTLNFSPSS 642
A + CAAR +CTL+F PS+
Sbjct: 414 ARKRTACAARKVICTLSFVPSA 435
>SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22)
Length = 884
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 309 ISHGSEMEIDKKQKIVRLTKSLKEYKFENTRRKQSFH 419
+S+G M++D+ + +LTK+ K K TRR++ H
Sbjct: 459 LSNGLAMKLDQDEHNEKLTKTRKLKKIIKTRRRRRKH 495
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,927,867
Number of Sequences: 59808
Number of extensions: 440671
Number of successful extensions: 840
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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