Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j01
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 42 6e-04
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 40 0.002
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 40 0.002
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math... 36 0.029
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 35 0.067
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 32 0.47
AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical ... 31 0.62
AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical ... 31 0.62
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 31 0.82
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 31 0.82
AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical ... 31 0.82
AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical ... 29 3.3
AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical ... 29 3.3
AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math ... 29 3.3
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 4.4
L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 29 4.4
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 29 4.4
Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF040645-6|AAB94976.1| 301|Caenorhabditis elegans Hypothetical ... 28 5.8
AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81104-10|CAB03214.1| 293|Caenorhabditis elegans Hypothetical p... 28 7.7
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 28 7.7
AL033510-11|CAA22071.1| 293|Caenorhabditis elegans Hypothetical... 28 7.7
AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical ... 28 7.7
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 28 7.7
AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math ... 28 7.7
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 499 MKNKSLYIAIAFPSPKILNLNVFDKLLTV-HTFEGLLKNLEDADFTLVSEDGEKFRVHKA 675
M+ +S I+ F + +N +V L + +F+ + + + +D TLV +DG +F H+
Sbjct: 22 MRTESAAISNNFNAVNSVNKSVVQHLDELSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRL 81
Query: 676 ILAAHSDVFKAM 711
ILA S F+AM
Sbjct: 82 ILAVRSSFFRAM 93
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 595 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
E L ++ + ADFTLV E+ E + HKAILAA S VF AM
Sbjct: 194 ENLYRSGKHADFTLVVEERE-LKAHKAILAARSPVFAAM 231
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 595 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
E L ++ + ADFTLV E+ E + HKAILAA S VF AM
Sbjct: 201 ENLYRSGKHADFTLVVEERE-LKAHKAILAARSPVFAAM 238
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 598 GLLKNLEDADFTLVSEDG-----EKFRVHKAILAAHSDVFKAMF 714
GL N + +DFTLV + + F +HKAILAA S VF AMF
Sbjct: 215 GLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMF 258
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 598 GLLKNLEDADFTLVSEDG-----EKFRVHKAILAAHSDVFKAMF 714
GL N + +DFTLV + + F +HKAILAA S VF AMF
Sbjct: 257 GLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMF 300
>AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math
domain containingprotein 5 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.029
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 544 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
KI+NL K T+ TF+ N E +D L ED EKF V K LA+HS FK +F
Sbjct: 125 KIINLMGIPKK-TLRTFDE--SNEEFSDVILTVED-EKFYVLKQFLASHSSHFKTLF 177
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 523 AIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVF 702
+++ P+ K L + D+ F L E +DF +V+ G +F H ILAA S+ F
Sbjct: 202 SLSSPNTKCLKI---DESSAHDAFTEFLSTGEFSDFIIVASCGREFPTHMCILAARSEYF 258
Query: 703 KAM 711
K +
Sbjct: 259 KVL 261
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 589 TFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
T E L K E D LV G K V+KA+L+ HS+ F+A+F
Sbjct: 119 TLEELFKPSERNDAVLVI-GGTKMHVNKALLSFHSEYFRALF 159
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +1
Query: 601 LLKNLEDADFTLVSE--DGEK--FRVHKAILAAHSDVFKAM 711
+L + + D T+V+ DGE+ FRVH L AHSDVF+ M
Sbjct: 215 MLASGDGTDMTIVAGPLDGEREQFRVHAYKLRAHSDVFQMM 255
>AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical
protein Y49F6C.5 protein.
Length = 243
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
E +D L ED EKF V K LA+HS FK++F
Sbjct: 116 EFSDVILAVED-EKFYVLKKFLASHSSYFKSLF 147
>AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical
protein C08E3.3 protein.
Length = 277
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 544 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
KI++ F+K + V F+ +K E +D LV ++ +F V K LAA S FKA+
Sbjct: 125 KIIDTWGFEKKVKVRNFDEAMK--EFSDVVLVVKE-TRFHVAKLFLAAQSGYFKAL 177
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 625 DFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
DF ++ +G+ R HKA+LAA S VF AM
Sbjct: 202 DFA-INVNGKIIRAHKAVLAARSPVFNAM 229
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 625 DFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
DF ++ +G+ R HKA+LAA S VF AM
Sbjct: 202 DFA-INVNGKIIRAHKAVLAARSPVFNAM 229
>AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical
protein F45C12.10a protein.
Length = 157
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 547 ILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
IL+ + F+K + F+ +K E +D LV +D KF V K LAA S+ FKA+
Sbjct: 53 ILDTSGFEKKEKLRNFDESMK--EFSDVVLVVKD-VKFYVLKTYLAAQSNYFKAL 104
>AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical
protein C08E3.2 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 595 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
EG++ D + ++ + ++ V+KA L+ HSD F A+F
Sbjct: 66 EGIINLPSDKNDAILLVEEQQLHVNKAFLSFHSDYFSALF 105
>Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical
protein K06B4.7 protein.
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 695 SLCAARMALCTLNFSPSSDTKVKSASSKFLSNPSKV*TVNNLSKTFRF 552
+ C+A C +N+S S+ T+ S F V +NNLS +F
Sbjct: 273 AFCSALFRYCQINYSKSAPTRFTELLSLFGIVNKSVDNMNNLSMMLQF 320
>AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical
protein F39E9.11 protein.
Length = 321
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 589 TFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
+F+ + + + D LV + K V+KA L+ HSD F+A+F
Sbjct: 152 SFDEMFLSSKKNDAVLVIGE-RKLHVNKAFLSYHSDYFRALF 192
>AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical
protein F45C12.12 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 649 GEKFRVHKAILAAHSDVFKAMF 714
GEK V+KA L+ HSD F +F
Sbjct: 143 GEKLHVNKAFLSFHSDFFHELF 164
>AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical
protein B0047.3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
E+ +V+ EKF V K LA+HS FK +F
Sbjct: 72 EEFSDVVVAVGNEKFYVLKVYLASHSTYFKTLF 104
>AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math
domain containingprotein 3 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
E +D L ED EKF V K LA+HS F A+
Sbjct: 148 EFSDVVLAVED-EKFHVLKKFLASHSTYFNAL 178
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 276 QRYCEGSFSISISHGSEMEIDKKQKIVRLTKSLKEYKFENTRRKQSFH 419
+R S S S +G+ I++K+KIV L + LKE R K+S H
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKE---TEKRIKESEH 531
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 276 QRYCEGSFSISISHGSEMEIDKKQKIVRLTKSLKEYKFENTRRKQSFH 419
+R S S S +G+ I++K+KIV L + LKE R K+S H
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKE---TEKRIKESEH 531
>L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical
protein C08C3.2 protein.
Length = 273
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 622 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
+D LV D EKF V K LA+HS F A+F
Sbjct: 147 SDVILVVGD-EKFYVLKLFLASHSSYFNALF 176
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 153 KFHRPNYYDIGGTYYLE-DLPDFWFTSKXEQVXDIFLLHIFIQRYCEGSFSISISHGSEM 329
K HR Y + LE D P++ + ++ E HI R E F SH SE
Sbjct: 99 KMHRSKYIKVHAWQALERDEPEYDYDTEDEAWLSDHT-HID-PRVLEKIFDTVESHSSET 156
Query: 330 EIDKKQKIVRLTKSL 374
+I + ++ L KSL
Sbjct: 157 QIASEDSVINLHKSL 171
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 153 KFHRPNYYDIGGTYYLE-DLPDFWFTSKXEQVXDIFLLHIFIQRYCEGSFSISISHGSEM 329
K HR Y + LE D P++ + ++ E HI R E F SH SE
Sbjct: 99 KMHRSKYIKVHAWQALERDEPEYDYDTEDEAWLSDHT-HID-PRVLEKIFDTVESHSSET 156
Query: 330 EIDKKQKIVRLTKSL 374
+I + ++ L KSL
Sbjct: 157 QIASEDSVINLHKSL 171
>Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical
protein W02A11.8 protein.
Length = 266
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 619 DADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
D +++ EKF V K LAA S FK +F
Sbjct: 110 DVSDVVINVQNEKFHVSKMFLAAQSSHFKLLF 141
>Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical
protein W02A11.5 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 616 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
E +D ++ +D EKF V K LAA S FK +F
Sbjct: 315 EVSDAVMIVKD-EKFHVSKMFLAAQSSNFKLLF 346
>AF040645-6|AAB94976.1| 301|Caenorhabditis elegans Hypothetical
protein F52C6.10 protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 610 NLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
N + +D L ED EKF V K LA+HS FK +
Sbjct: 141 NKKFSDVILAIED-EKFYVLKKFLASHSTYFKTL 173
>AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical
protein F39E9.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 595 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
E L + ++ F ++ E K V+KA L+ HSD F+A+F
Sbjct: 138 EMFLPSEKNDAFLVIGE--RKLHVNKAFLSYHSDYFQALF 175
>Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical
protein F29C12.5 protein.
Length = 468
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 610 NLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 714
N E +D V E KF V K ILA+HS FK +F
Sbjct: 300 NKEFSDVIFVVEHN-KFYVLKQILASHSSHFKKIF 333
>Z81104-10|CAB03214.1| 293|Caenorhabditis elegans Hypothetical
protein Y40H7A.8 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 469 MCLHILSNLALVHLQFVWNDCFLLVFSNLYSFSDFVNRTI 350
+C H LS L + +WN ++LV+ + +S V + I
Sbjct: 101 ICTHRLSAAKLENANKIWNRYYILVYLGILVYSYLVTKLI 140
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 649 GEKFRVHKAILAAHSDVFKAMF 714
G R H+ ILAA S FKAMF
Sbjct: 119 GSVIRAHRYILAAASPYFKAMF 140
>AL033510-11|CAA22071.1| 293|Caenorhabditis elegans Hypothetical
protein Y40H7A.8 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 469 MCLHILSNLALVHLQFVWNDCFLLVFSNLYSFSDFVNRTI 350
+C H LS L + +WN ++LV+ + +S V + I
Sbjct: 101 ICTHRLSAAKLENANKIWNRYYILVYLGILVYSYLVTKLI 140
>AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical
protein H41C03.1 protein.
Length = 396
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 261 LHIFIQRYCEGSFSISISHGSE--MEIDKKQKI 353
++I I R+C+ +F + I HG + +EID+ ++
Sbjct: 304 VYIVINRFCDRTFGMGIWHGDDECLEIDEMNEL 336
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 649 GEKFRVHKAILAAHSDVFKAMF 714
G R H+ ILAA S FKAMF
Sbjct: 119 GSVIRAHRYILAAASPYFKAMF 140
>AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical
protein F39E9.12 protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 655 KFRVHKAILAAHSDVFKAMF 714
K V+KA L+ HSD F+A+F
Sbjct: 402 KIHVNKAFLSYHSDYFRALF 421
>AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math
domain containingprotein 1 protein.
Length = 302
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Frame = +1
Query: 448 CLEYVSTYXFSNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGL----LKNL 615
CL + STY F ++ GF + K + + + + + + + G+ L++
Sbjct: 80 CLSHSSTYIFQSIG-GFGRRKFVSWDTLVKDHLVNDSIIMEATVMITKMTGISKKKLRSF 138
Query: 616 EDA-----DFTLVSEDGEKFRVHKAILAAHSDVFKAM 711
E + D L ED +KF V + LA+HS FK++
Sbjct: 139 EKSEEQFSDVVLAVED-KKFFVLRKFLASHSSYFKSL 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,019,538
Number of Sequences: 27780
Number of extensions: 363690
Number of successful extensions: 933
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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