Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i23
(527 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 114 9e-27
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 89 5e-19
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 68 1e-12
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 66 4e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 61 1e-10
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 57 2e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 42 4e-05
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 38 7e-04
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 29 0.43
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 28 0.99
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 1.3
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 2.3
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.0
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 25 7.0
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 25 9.2
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 114 bits (274), Expect = 9e-27
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 126 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 305
++K +IT + ++V+FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84
Query: 306 DLAESYGVRGYPTLKFFRNGSPI-DYSXGRQADDIISWLKKKTGPPAVEVTSAEQAKELI 482
DL Y +RGYPTL F+NG I YS R+ D ++ +++K+ P V+ S + + +
Sbjct: 85 DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQL-LPTVKPISKDTLENFV 143
Query: 483 D-ANTVIVFGFFSDQ 524
+ A+ + V FF DQ
Sbjct: 144 EKADDLAVVAFFKDQ 158
Score = 88.6 bits (210), Expect = 5e-19
Identities = 44/111 (39%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Frame = +3
Query: 105 TEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 281
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411
Query: 282 KVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSXGRQADDIISWLKK 425
K+DAT E D+ S + G+PT+ FF+ +P+ Y R +D+ +++ K
Sbjct: 412 KIDAT-ENDI--SVSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 88.6 bits (210), Expect = 5e-19
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +3
Query: 36 IEMRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKS 215
+ + +L F AL L V +++ L T+ + + L+EFYA WCGHCKS
Sbjct: 1 MRLPLLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKS 56
Query: 216 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS-PIDYSXG 389
LAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F +GS P+ YS
Sbjct: 57 LAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNA 115
Query: 390 RQADDIISWLKKKTGPPAVEVTSAEQAKELIDAN 491
R D + ++ +KTG ++ EL N
Sbjct: 116 RDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLN 149
Score = 76.6 bits (180), Expect = 2e-15
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = +3
Query: 114 NVLVLSKANFETVITTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 290
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + E +++ K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199
Query: 291 ATQEQDLAESYGVRGYPTLKFF---RNGSPIDYSXGRQADDIISWLKKKTG 434
A D+ + V +PT+KFF P Y R + +I ++ KK+G
Sbjct: 200 ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 67.7 bits (158), Expect = 1e-12
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +3
Query: 51 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 230
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 231 AKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLK 350
K A+ L P+ DA Q + + Y V+G+PT+K
Sbjct: 71 QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIK 109
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 65.7 bits (153), Expect = 4e-12
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = +3
Query: 123 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 302
+ S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A + AKV+ ++
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63
Query: 303 QDLAESYGVRGYPTLKFFRNGSPIDYSXGR--QA--DDIISWLKKKTGPPAVEVTSAEQA 470
+ +A GV+ PT FF NG ID G QA + + K TG A+ +S+
Sbjct: 64 RQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPV 123
Query: 471 K 473
K
Sbjct: 124 K 124
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 60.9 bits (141), Expect = 1e-10
Identities = 34/101 (33%), Positives = 49/101 (48%)
Frame = +3
Query: 123 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 302
V S ++ T I+ + +V+FYA WCG CK L P KL+E+ V+A +
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77
Query: 303 QDLAESYGVRGYPTLKFFRNGSPIDYSXGRQADDIISWLKK 425
D+A+ GV PT+ FR G +D G + S L K
Sbjct: 78 SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 56.8 bits (131), Expect = 2e-09
Identities = 25/89 (28%), Positives = 47/89 (52%)
Frame = +3
Query: 123 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 302
V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60
Query: 303 QDLAESYGVRGYPTLKFFRNGSPIDYSXG 389
++A GV P+ ++NG I+ G
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 42.3 bits (95), Expect = 4e-05
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 177 VEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGYPTLK 350
+++Y P CG CK L P + K E E S +VD ++E L+ +R PTL
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAVPTLY 104
Query: 351 FFRNGSPID 377
++NG ++
Sbjct: 105 LYQNGEIVE 113
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/142 (16%), Positives = 61/142 (42%)
Frame = +3
Query: 102 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 281
PT + + A+ + +T E ++FY+ C C ++ + A ++ + +A
Sbjct: 278 PTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRM---RGKLNVA 334
Query: 282 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSXGRQADDIISWLKKKTGPPAVEVTSA 461
++ + + Y ++ +PT FF+ + ++Y D++S+ ++ EV
Sbjct: 335 HINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELL 394
Query: 462 EQAKELIDANTVIVFGFFSDQS 527
+ + + ++ F+ D S
Sbjct: 395 DTVNAEKNGDVFFLY-FYDDDS 415
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 38.3 bits (85), Expect = 7e-04
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +3
Query: 165 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 344
+ IL+ FYAPW CK + + + A++ K++A + D+AES+ V P
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76
Query: 345 LKFFRNGSPIDYSXGRQADDIISWLKKKTGPPAVEVTSAEQAKE 476
+ G + + + + P +++S + E
Sbjct: 77 FVLIHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 29.1 bits (62), Expect = 0.43
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +3
Query: 204 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 383
+C L P +AA L + +SP L VDA + L S+GVR + G+ +
Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240
Query: 384 XGRQADDIISWLKKKTGPPAVEVTSA 461
G A ++S K K AV+ T+A
Sbjct: 241 NGESA--LVSACKVK----AVDTTAA 260
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 27.9 bits (59), Expect = 0.99
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 309 LAESYGVRGYPTLKFFRNGSPIDYS--XGRQADD---IISWLKKKTGPPAVEVT 455
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 112 KMCSF*VKLTLKL*LQPRSTF*LNSMLHGAATANLWHRNTP 234
K +F L LQP T N +L+ + NLW R+ P
Sbjct: 620 KSANFDFSFLKSLDLQPTITLGKNDLLNAILSQNLWFRSLP 660
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 26.6 bits (56), Expect = 2.3
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +3
Query: 192 PWCG-HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 368
PW + ++L + + KL E + K D + L G++ Y ++ F N
Sbjct: 226 PWKNPNTENLTSQVSIKEPKLYEPHPTTAIKKADGKIIRILVIDVGMK-YNQIRCFLNRG 284
Query: 369 ------PIDYSXGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFG 509
P DY ++ D + ++ G P++ ++ K ++++ TV VFG
Sbjct: 285 VELLVVPWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFG 336
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 295 VASTFASLIGDSSSASFVAALAYSGARDLQW 203
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 473 FSLFSRGDLNSRGASLLLQPTDDVISLTTT*IVDRT 366
F S+G+L+ SLL +D+V +TTT +VD T
Sbjct: 304 FEFDSKGNLD---VSLLKSLSDEVNMITTTSLVDNT 336
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 24.6 bits (51), Expect = 9.2
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +3
Query: 108 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKL 278
+ENV ++ K+N+ + T E + + + G+ ++ P YA ++ ++S K+
Sbjct: 4 KENVNLVEKSNYVALENTREIDVFDEFLNAIGNENTITPVYADSSLTHLRKKSYTKV 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,963,265
Number of Sequences: 5004
Number of extensions: 36014
Number of successful extensions: 128
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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