Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i22
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    25   0.67 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.2  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 366 NSISPFEPNHLLNGNRY 316
           +S SP+ PNH L+G+++
Sbjct: 68  SSTSPYPPNHPLSGSKH 84


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +3

Query: 243 TDLKLIVKHIPKLSKQPKHLVVLSDSDYHSIDDLARMVI 359
           TD+  + +   ++SK PK ++ +SD  +  +D +A + I
Sbjct: 232 TDVSNVKRKSKEISKLPKSMLAISDPVF-IVDQVAALHI 269


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +3

Query: 243 TDLKLIVKHIPKLSKQPKHLVVLSDSDYHSIDDLARMVI 359
           TD+  + +   ++SK PK ++ +SD  +  +D +A + I
Sbjct: 232 TDVSNVKRKSKEISKLPKSMLAISDPVF-IVDQVAALHI 269


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 522 HLYTHSNQVSLTILYTPEHLSC 457
           H YTH+N++  ++   P + SC
Sbjct: 37  HNYTHNNEMYHSVKEEPIYESC 58


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 292 GCLLSFGICFTISFKSVFV 236
           G LL FG+ F +  +++F+
Sbjct: 599 GLLLMFGVSFLLITQTIFI 617


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 408 GQLSYQEEKLFNAVE 452
           GQL   +EKL++A+E
Sbjct: 331 GQLDPTKEKLYDAIE 345


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 518 KWHSCT*NCCEYFFLSERTFHNYTMYQRN 604
           KW+  T +     F+S   +H YT+ + +
Sbjct: 4   KWYYITISMAFIIFVSLEIYHIYTVVEES 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,353
Number of Sequences: 336
Number of extensions: 2760
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)