Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i22
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    27   0.64 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.5  
AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding pr...    23   5.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.8  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 145 KANKNCRSNRDSIIHIKLLSATYVTIVL 62
           KA K  R+NR +++H+ + +A  V +VL
Sbjct: 570 KAQKAGRTNRAAVLHLAVCTAVGVVVVL 597


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 348 RMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 452
           R ++ + VAGI F+S Y      +++ E+L  A+E
Sbjct: 138 RGLVAAQVAGITFISVYAPPSLSAHEFERLLGAIE 172


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 369 VAGIPFLSFYDVSGQLSYQE-EKLFNAVE 452
           VAGI F+S Y     LS QE E+L  AVE
Sbjct: 82  VAGIDFISVY-APPSLSPQEYERLLEAVE 109


>AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding
           protein AgamOBP28 protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +3

Query: 294 KHLVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQL--SYQEEKLFNAVEKNK 461
           +HLV+L D D+  +D   +     L   +   +F D +G+L   Y  E+L    EK+K
Sbjct: 44  EHLVLLRDGDFSKVDADTKCF---LRCFLQQANFMDAAGKLQNDYVIERLSLNREKSK 98


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 575 TSVLTRKNIHNNFMCRN 525
           T++LT  N   N+MCR+
Sbjct: 538 TTILTSVNSSGNYMCRS 554


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,000
Number of Sequences: 2352
Number of extensions: 11672
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)