Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i22
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.1
At1g03960.2 68414.m00382 calcium-binding EF hand family protein ... 30 1.4
At1g03960.1 68414.m00381 calcium-binding EF hand family protein ... 30 1.4
At3g55160.1 68416.m06126 expressed protein 29 2.4
At5g44090.1 68418.m05394 calcium-binding EF hand family protein,... 29 3.2
At1g68030.1 68414.m07772 PHD finger protein-related contains low... 28 5.7
At5g66710.1 68418.m08409 protein kinase, putative similar to pro... 27 7.5
At5g55390.1 68418.m06901 hydroxyproline-rich glycoprotein family... 27 7.5
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 27 7.5
At5g45940.1 68418.m05649 MutT/nudix family protein contains Pfam... 27 9.9
At5g04850.1 68418.m00508 SNF7 family protein contains Pfam domai... 27 9.9
At3g50810.1 68416.m05564 integral membrane protein, putative con... 27 9.9
>At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 456
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 174 GAQNVYCRYWLKKHSLQDYEVTKTDLKLIVKHIPKLSKQPKHLVVLSDSDYHSI----DD 341
GA +VY RY++K +S D E ++L + ++ P ++ + ++++ D
Sbjct: 136 GAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFYNLMAEFAD 195
Query: 342 LARMVIWSLVAGIPFLSFYDVSGQL 416
R V W LV SFY++ ++
Sbjct: 196 CLRYVKWVLVN-----SFYELESEI 215
>At1g03960.2 68414.m00382 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand
Length = 389
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 342 LARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVEKNKKGVPGCIKWSKKPDLNGYTN 521
L ++ + + IP V G++SY++ F E++K P W K DL+G N
Sbjct: 201 LTYRIVDRIFSQIPRKFTSKVEGKMSYEDFVYFILAEEDKSSEPSLEYWFKCVDLDG--N 258
Query: 522 GI 527
G+
Sbjct: 259 GV 260
>At1g03960.1 68414.m00381 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand
Length = 529
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 342 LARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVEKNKKGVPGCIKWSKKPDLNGYTN 521
L ++ + + IP V G++SY++ F E++K P W K DL+G N
Sbjct: 341 LTYRIVDRIFSQIPRKFTSKVEGKMSYEDFVYFILAEEDKSSEPSLEYWFKCVDLDG--N 398
Query: 522 GI 527
G+
Sbjct: 399 GV 400
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 519 NGIPAHKIVVNIFS-CQNGRSTITQCIKEMCEE 614
N +P HK +V+ + S I+ C KE+C+E
Sbjct: 103 NSLPLHKTLVSALAKTTKFHSVISSCFKELCDE 135
>At5g44090.1 68418.m05394 calcium-binding EF hand family protein,
putative / protein phosphatase 2A 62 kDa B'' regulatory
subunit, putative contains Pfam profile: PF00036 EF
hand; identical to cDNA protein phosphatase 2A 62 kDa
B'' regulatory subunit GI:5533378
Length = 538
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 402 VSGQLSYQEEKLFNAVEKNKKGVPGCIKWSKKPDLNG 512
V G++SY++ F E++K P W K DL+G
Sbjct: 370 VEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLDG 406
>At1g68030.1 68414.m07772 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 314
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 459 KKGVPGCIKWSKKPDLNGYTNGIP--AHKIVVNIFSCQNGRSTITQCIKE 602
K G PG KW+ +P + +P A ++++ SC+N + ++ C +E
Sbjct: 113 KPGAPGLTKWNLQPFIKHKLLSLPKCALELMIEPSSCEND-TQVSPCSEE 161
>At5g66710.1 68418.m08409 protein kinase, putative similar to
protein kinase ATN1 GP|1054633 [Arabidopsis thaliana]
Length = 405
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 490 DHFIHPGTPFLFFSTALKSFSS 425
D +HP PFL S LKSF S
Sbjct: 21 DKTLHPNYPFLMSSHGLKSFES 42
>At5g55390.1 68418.m06901 hydroxyproline-rich glycoprotein family
protein
Length = 1332
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 252 KLIVKHIPKLSKQPKHLVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYD--VSGQLSYQ 425
K+++ +P +++ + + S YHSI + R++ SLV I FL+ D S +
Sbjct: 823 KILILIVPPETERFQFPSISSAPLYHSITLIYRLLSLSLVKSITFLNRLDKKKSSYVLIW 882
Query: 426 EEKLFNAVEKNKKGVPGCIKWSKK 497
E+K F + N +PG + K
Sbjct: 883 EDKTF--LSGNSFYLPGSVNEEDK 904
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 QLSYQEEKLFNAVEKNKKGVPGCIKWSKKPD 503
QLSY E+K + + G+P +W KK D
Sbjct: 74 QLSYLEKKQLSVNDPRLSGIPPPPRWKKKID 104
>At5g45940.1 68418.m05649 MutT/nudix family protein contains Pfam
profile PF00293: NUDIX domain
Length = 222
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 231 EVTKTDLKLIVKHIPKLSKQPKH---LVVLSDSDYHSIDDLARMVIWSLVAGI 380
E+ L++ +K + +++ +H +L DY+S D +IW+L AGI
Sbjct: 143 EIFDVPLEMFLKDRNRRAEEREHEGERYLLQYFDYYSEDKERSFIIWALTAGI 195
>At5g04850.1 68418.m00508 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 235
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 399 DVSGQLSYQEEKLFNAVEKNKKGVPGCIKWSKKPDLNGYTN 521
D+ G+L E + N E + GVP ++ K+PDLN N
Sbjct: 163 DLLGELDALEADMGNETEAD--GVPSYLQPDKEPDLNDELN 201
>At3g50810.1 68416.m05564 integral membrane protein, putative
contains 4 transmembrane domains; contains Pfam PF04535
: Domain of unknown function (DUF588); similar to
putative ethylene responsive element binding protein
(GI:22135858) [Arabidopsis thaliana]
Length = 235
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 95 FNVNYAVTIASTVLVCFATFDFKFYCWCSECLLQIL 202
F + + TI S + F FDF FY + + C L ++
Sbjct: 14 FALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMV 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,780,942
Number of Sequences: 28952
Number of extensions: 222416
Number of successful extensions: 599
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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