Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i20
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 33 0.027
SPBC2F12.10 |||mitochondrial ribosomal protein subunit L35|Schiz... 30 0.25
SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|... 28 1.0
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.0
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 28 1.3
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 28 1.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 27 3.1
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 27 3.1
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 26 4.1
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 4.1
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 25 7.2
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 25 7.2
SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator Tip4... 25 7.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 7.2
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 25 9.5
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.5
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.5
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 25 9.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.5 bits (73), Expect = 0.027
Identities = 28/101 (27%), Positives = 51/101 (50%)
Frame = +2
Query: 329 ANGTTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTL 508
A+ T+ L +S AT + A ++ +L + + SS T++ +S ST+ SL
Sbjct: 102 ASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161
Query: 509 RATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFCTS 631
+TN S P+S +++ L +T+ S T++SL +S
Sbjct: 162 SSTNSTTSATPTSSATSS---SLSSTAASNSATSSSLASSS 199
Score = 27.5 bits (58), Expect = 1.8
Identities = 24/107 (22%), Positives = 46/107 (42%)
Frame = +2
Query: 308 PVKNPHFANGTTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHST 487
P+ + + T ATS + + + L PS+ A + T +S ++ +S ++
Sbjct: 254 PLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNS 313
Query: 488 SRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFCT 628
+ T A++ P+S + S+ +T S+ S T TS T
Sbjct: 314 ---TTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASST 357
Score = 27.1 bits (57), Expect = 2.3
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 449 SSCTNNHRSSHS-TSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFC 625
SS T++ +S S TS SL +TN S P+S T+ +S+ S +TTS
Sbjct: 73 SSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTS---SSATSSSLASSSTTSSSL 129
Query: 626 TSSSV 640
SSS+
Sbjct: 130 ASSSI 134
Score = 27.1 bits (57), Expect = 2.3
Identities = 25/101 (24%), Positives = 45/101 (44%)
Frame = +2
Query: 332 NGTTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLR 511
+ T+ LA+S T A S+ + A + + +S + N +S + + S++
Sbjct: 189 SATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSIS-- 246
Query: 512 ATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFCTSS 634
+ V S +S STT ATS+ T+SL +S+
Sbjct: 247 -STVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSST 286
>SPBC2F12.10 |||mitochondrial ribosomal protein subunit
L35|Schizosaccharomyces pombe|chr 2|||Manual
Length = 370
Score = 30.3 bits (65), Expect = 0.25
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Frame = +1
Query: 271 YYTLAMTDPDAPSRKEPTFREWHHWLVGN--IQGNEVNSGETLSQYVGSGPP---EKTGL 435
+Y++ D D P+ + F +WL+ N I+ ++ +T + PP
Sbjct: 234 HYSVITLDLDVPNYETNRFETHCNWLLTNIPIEASKRVPIDTSKAFFQYRPPIVHRGEDK 293
Query: 436 HRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYD-DY 612
HR + L+ +Q S + P +++ R F ++EF Y+L +P+ + + + +D D
Sbjct: 294 HRILTLVLRQKSS-SISIP----SNALVRERFDLSEFCSIYDL-EPVGAHLWRSGWDSDA 347
Query: 613 VPILYK 630
V +L K
Sbjct: 348 VALLSK 353
>SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 160
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 55 LFQYIRVLTRAMSTVAKSFEASQVVPDV-IPKAPAALLQVKY 177
LFQ + +LT S A ++ SQV+P + I A AL Q KY
Sbjct: 6 LFQSVGILTPCGSAGAIAYITSQVLPAILIGPADVALAQWKY 47
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -1
Query: 360 DVANQPVVPFAKCGFFTGRRIRVGHGQSVVLSWLRVPFH*RLVFH-----LSWSQLITFF 196
D + + A+C F + + + +S++ S +R+ ++ + ++ L W Q I +
Sbjct: 438 DYLDNDIYVHARCLFLLTKTLNLDSLKSILCSRVRLYYNIEIAYYFTDVLLKWFQPIIRY 497
Query: 195 NFDSAWVFH 169
FD+A +F+
Sbjct: 498 EFDNALIFY 506
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -1
Query: 426 LFRRSRAHVLGQSFAGVYLVALDVANQPVVPFAKCGFFTGRRIRVGHGQSVVL 268
LF H +G +AG L + VA P+ PFA FF GR+IR +VVL
Sbjct: 527 LFAVQMFHNMGVGWAGSLLGFIAVALIPM-PFAF--FFFGRKIREKSKMAVVL 576
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 534 FEIGTFVARSVSESRLVECELRWLF 460
F +G FVARS+ +SR++ + LF
Sbjct: 1375 FALGQFVARSIYDSRIISIQFNPLF 1399
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 437 TDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSS---PRSTT*GIRLRATSTKRSMT 607
T + SS T++ SS S+S + + +++ IS SS P ST+ I ++S+ +
Sbjct: 243 TSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTS 302
Query: 608 TTSLFCTSSS 637
T+S +SSS
Sbjct: 303 TSSTISSSSS 312
Score = 25.4 bits (53), Expect = 7.2
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 437 TDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSS-PRSTT*GIRLRATSTKRSMTTT 613
T + SS +++ SS S+S S T ++ + S SS P ST+ I ++S+ +T
Sbjct: 262 TASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTL 321
Query: 614 SLFCTSSS 637
S SSS
Sbjct: 322 SSSSMSSS 329
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 26.6 bits (56), Expect = 3.1
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +1
Query: 133 DVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDPDAPSR 312
D+I K L++ +P G + LTP VK E V+ G+ + D P+
Sbjct: 994 DLISKGATKPLEIAFPDGASILVAFRLTPVPVKLE-EVEMYENMGEMTVDVIKATDLPAA 1052
Query: 313 KEPTFREWHHWLVGNIQGNEVNSGET 390
+ ++V +QG EV +T
Sbjct: 1053 DSNGKSD--PFVVFELQGEEVYRTKT 1076
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 544 FAKKYNLGDPIAGNFYEAQYDDYVPI 621
F K+Y DP AGN ++A YDD + +
Sbjct: 517 FYKQYKPFDP-AGNKHDANYDDIIEL 541
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +2
Query: 425 RQACTDTCSSCTNNHRSSHSTSRD----SLTLRATNVPISKLPSSP 550
+Q +D+ S ++NH S+H T D S + ++ P +LP+SP
Sbjct: 36 KQEKSDSTLSSSSNHDSNHDTPADVDNSSNVNKNSSSPERELPTSP 81
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +1
Query: 376 NSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANF 531
N+G QY G P+ TG + + QP + F +P+ T + F
Sbjct: 329 NTGFVQPQYTGFVQPQHTGFVQPQATGFMQPQRTGFVQPQATGFVQPQATGF 380
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 319 PTFREWHHWLVGNIQGNE--VNSGETLSQ 399
P+F+E HW+V ++ E + SG LSQ
Sbjct: 139 PSFKETPHWIVKDLSPAESLIPSGPILSQ 167
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 449 SSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFCT 628
SS +++ SS +++ S +L ++ S PS+ STT I +++ S++T+S
Sbjct: 111 SSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTT-SIPSISSTISSSVSTSSFTSL 169
Query: 629 SSS 637
SSS
Sbjct: 170 SSS 172
>SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator
Tip41|Schizosaccharomyces pombe|chr 3|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 7.2
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 310 RKEPTFREWHHWLVGNIQGNEVNSGE--TLSQYVGSGPPEKTGLHRYVFLLYK-QPSKLT 480
+K+ F + +W + +G+ + S E L +G PPE T + Y+ + YK QP
Sbjct: 2 QKQDDF-SFKYWTIKVQRGSILKSHEMENLQSTLGFPPPEMTFGNNYISIEYKNQPVVGF 60
Query: 481 FDEPRLTNTSSDKRANFKIAEFAKKY 558
F E L + K + FAK +
Sbjct: 61 FTEDALKMVGT-KPEDVMQVSFAKDW 85
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 449 SSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLFCT 628
SS + + + TS SLT +P + LP+S + T + +T+ S S F +
Sbjct: 391 SSFPDGFKPINPTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVSNNTQSSFLIISTFTS 450
Query: 629 S 631
S
Sbjct: 451 S 451
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 401 YWDKVSPEFTSLPWMLPTSQWCHSRN 324
YW V+P T L L + WC + N
Sbjct: 23 YWPSVAPAATELISKLINAFWCQTLN 48
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 464 NHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRS 601
+++ S STS T A N I++ +SP S++ ++T+T +S
Sbjct: 131 DNKPSASTSTAVPTTEARNTSITEPANSPSSSSSSASTKSTATTQS 176
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 327 SRMAPLAGWQHPGQRGKLRRNFVPVRGLWTSGKDRPAQIRVPLVQTTIEAHIRRAET 497
SR +A + Q+G L R+FVP + SG PA T EA ++ ET
Sbjct: 482 SRAGFVAALESRLQKGPLMRSFVPNKSKSPSGTKSPAS------GETSEAGVKETET 532
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 175 YPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY 273
YP+GV G+E TP ++ E G++
Sbjct: 67 YPTGVTESYGDEYTPVDTASSGINQYSTEKGKF 99
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 9.5
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 437 TDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTS 616
T SS ++ SS S S+T ++ + S +PS+ S + + ++ST S ++TS
Sbjct: 536 TSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVS---SILSSSTS-SPSSTS 591
Query: 617 LFCTSSS 637
L +SSS
Sbjct: 592 LSISSSS 598
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,841,551
Number of Sequences: 5004
Number of extensions: 62811
Number of successful extensions: 193
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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