Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i17
(556 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. 179 5e-45
BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 ... 179 5e-45
BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 ... 179 5e-45
BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 ... 179 5e-45
AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex... 179 5e-45
AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens ... 179 5e-45
AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. 179 5e-45
AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. 179 5e-45
Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein. 32 1.6
U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine kinase-... 32 1.6
BC099907-1|AAH99907.1| 976|Homo sapiens general transcription f... 32 1.6
BC070484-1|AAH70484.1| 957|Homo sapiens general transcription f... 32 1.6
AF038969-1|AAC08315.1| 957|Homo sapiens general transcription f... 32 1.6
AF038968-1|AAC08314.1| 977|Homo sapiens general transcription f... 32 1.6
AF038967-1|AAC08313.1| 978|Homo sapiens general transcription f... 32 1.6
AF035737-1|AAC08312.1| 998|Homo sapiens general transcription f... 32 1.6
AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein. 32 1.6
AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein. 32 1.6
AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein. 32 1.6
AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein. 32 1.6
AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein. 32 1.6
AC004883-1|AAL93085.1| 998|Homo sapiens general transcription f... 32 1.6
DQ139309-1|AAZ73614.1| 1104|Homo sapiens transient receptor pote... 30 6.3
AY328400-1|AAP92167.1| 1104|Homo sapiens transient receptor pote... 30 6.3
AY090109-1|AAM10446.1| 1104|Homo sapiens transient receptor pote... 30 6.3
AB061779-1|BAB86335.1| 1095|Homo sapiens LTRPC6 protein. 30 6.3
>CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex
GINS protein PSF2 variant protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens
cDNA FLJ10413 fis, clone NT2RP1000063. ).
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein.
Length = 185
Score = 179 bits (436), Expect = 5e-45
Identities = 74/146 (50%), Positives = 110/146 (75%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPD 298
E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 299 WMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIR 478
WMDVE LE +++ E++ FT MP+ +YM KL+L A++++P A EI+T++KD+WD R
Sbjct: 65 WMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTR 124
Query: 479 MSKLRTSMDALMKTGGGYGRLDHLTM 556
++KLR S D+ ++ + +LD+LT+
Sbjct: 125 IAKLRVSADSFVRQQEAHAKLDNLTL 150
>Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine
kinase-associated protein-135 protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>BC099907-1|AAH99907.1| 976|Homo sapiens general transcription
factor II, i protein.
Length = 976
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 494 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 543
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 544 VRITKLRKQVEEI 556
>BC070484-1|AAH70484.1| 957|Homo sapiens general transcription
factor II, i protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AF038969-1|AAC08315.1| 957|Homo sapiens general transcription
factor 2-I protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AF038968-1|AAC08314.1| 977|Homo sapiens general transcription
factor 2-I protein.
Length = 977
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 495 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 544
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 545 VRITKLRKQVEEI 557
>AF038967-1|AAC08313.1| 978|Homo sapiens general transcription
factor 2-I protein.
Length = 978
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 496 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 545
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 546 VRITKLRKQVEEI 558
>AF035737-1|AAC08312.1| 998|Homo sapiens general transcription
factor 2-I; alternative splice product protein.
Length = 998
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
>AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein.
Length = 957
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 475 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 524
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 525 VRITKLRKQVEEI 537
>AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein.
Length = 978
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 496 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 545
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 546 VRITKLRKQVEEI 558
>AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein.
Length = 977
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 495 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 544
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 545 VRITKLRKQVEEI 557
>AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein.
Length = 998
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
>AC004883-1|AAL93085.1| 998|Homo sapiens general transcription
factor 2I protein.
Length = 998
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 PDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWD 472
P W + LE I + R +F K P +L+ S E P T +K+ W+
Sbjct: 516 PSWYGIPRLEKIIQVGNRIKFVIKRP--------ELLTHSTTE--VTQPRTNTPVKEDWN 565
Query: 473 IRMSKLRTSMDAL 511
+R++KLR ++ +
Sbjct: 566 VRITKLRKQVEEI 578
>DQ139309-1|AAZ73614.1| 1104|Homo sapiens transient receptor
potential subfamily M member 8 protein.
Length = 1104
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 382 IVFIWHLCEESGTLFLF-FNILQNFHV--HPVRRDNMALLFLL*HDSQPEWYVH 230
+VF W++ L LF + +L +FH HP +L+F+L D +WYV+
Sbjct: 736 VVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQWYVN 789
>AY328400-1|AAP92167.1| 1104|Homo sapiens transient receptor
potential subfamily M member 8 variant protein.
Length = 1104
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 382 IVFIWHLCEESGTLFLF-FNILQNFHV--HPVRRDNMALLFLL*HDSQPEWYVH 230
+VF W++ L LF + +L +FH HP +L+F+L D +WYV+
Sbjct: 736 VVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQWYVN 789
>AY090109-1|AAM10446.1| 1104|Homo sapiens transient receptor
potential cation channel protein protein.
Length = 1104
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 382 IVFIWHLCEESGTLFLF-FNILQNFHV--HPVRRDNMALLFLL*HDSQPEWYVH 230
+VF W++ L LF + +L +FH HP +L+F+L D +WYV+
Sbjct: 736 VVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQWYVN 789
>AB061779-1|BAB86335.1| 1095|Homo sapiens LTRPC6 protein.
Length = 1095
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 382 IVFIWHLCEESGTLFLF-FNILQNFHV--HPVRRDNMALLFLL*HDSQPEWYVH 230
+VF W++ L LF + +L +FH HP +L+F+L D +WYV+
Sbjct: 727 VVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQWYVN 780
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,678,944
Number of Sequences: 237096
Number of extensions: 1844941
Number of successful extensions: 7520
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7520
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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