Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i17
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical pr...   113   1e-25
Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical pr...    30   0.97 
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical p...    27   9.1  
Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical
           protein F31C3.5 protein.
          Length = 180

 Score =  113 bits (271), Expect = 1e-25
 Identities = 52/146 (35%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = +2

Query: 125 EFIGENRIISITPNFTHDK-IYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDW 301
           EFI  N +I + P+ + D+ I+LI G+ GPF AG+P  +P+W AI++K+K  C V+ P W
Sbjct: 7   EFIAGNSLIEVIPSISDDRPIHLISGDIGPFEAGVPCRIPVWTAILMKRKHNCKVVAPQW 66

Query: 302 MDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIRM 481
           MDV+ L+ I   E  S+   K+P +H+   + +++  A ED+     +K++++DI+D R 
Sbjct: 67  MDVDELKKILTSETESQGLAKLP-DHFFEISHMLVRDAREDIFEVEAVKSLVQDIYDRRD 125

Query: 482 SKLRTS-MDALMKTGGGYGRLDHLTM 556
           +KLR+S ++ L +    + +LD++ +
Sbjct: 126 AKLRSSAIEFLRQNQTCHAQLDNVQL 151


>Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical
           protein T15D6.10 protein.
          Length = 507

 Score = 30.3 bits (65), Expect = 0.97
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = -1

Query: 322 LQNFHVHPVRRDNMALLFLL*HDSQPEWYVHR*TSTKRTKFTAYQVYFIMGKVWCYTDYP 143
           L  FH   +   +  + +++ H++ PE Y +    T    F  YQ    +GKVW      
Sbjct: 328 LDTFHTASIANLHFRVKWVMKHNNTPERYENDKQLTSEMLFHKYQNLSRIGKVWQQPKCI 387

Query: 142 ILTNKLDFIRFH 107
           I    + F+  H
Sbjct: 388 IRPENVAFMTIH 399


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 474 ISQMSLIIVFISGALGTSSAAEPSISLASTI*CSF 370
           +  MSLI+ FISGA G    A   + L   I C++
Sbjct: 384 VPNMSLILFFISGAFGFCGLAAYPVGLELAIECTY 418


>Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical
           protein F11A5.13 protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 383 MVEAKLILGSAAEDVPNAPEI 445
           +V AKLI+ +A  D+PN PEI
Sbjct: 93  LVTAKLIVLNAKGDLPNVPEI 113


>Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical
           protein T10H4.2 protein.
          Length = 363

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 184 ILDMR*IWSVSCWFTCERTTLAGYHAKAE 270
           IL    IW +SC+F C  T    Y  K E
Sbjct: 142 ILTFSSIWGLSCYFLCGPTENKDYELKLE 170


>AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical
           protein F58H7.1 protein.
          Length = 607

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 290 PPDWMDVEVLENIKEEEKRSRFFT--KMPNEHYMVEAKLI 403
           PPD  DV+ +E+I+ EE +    T  + P EH  +  +L+
Sbjct: 29  PPDHQDVDHIEDIEVEETQVIITTTKQGPAEHLKIHIELV 68


>AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical
           protein F38A1.10 protein.
          Length = 275

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -1

Query: 205 KFTAYQVYFIMGKVWCYTDYPILTNKLDFIRFHY 104
           KF A Q+ F   + WC+   P++++ L ++   Y
Sbjct: 33  KFVAQQMTFNDARNWCHYQNPVISSYLAYVPDQY 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,959,482
Number of Sequences: 27780
Number of extensions: 283662
Number of successful extensions: 753
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)