Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i17
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 25 0.68
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 0.68
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.1
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 22 3.6
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 3.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 3.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.4
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 8.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 8.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 8.4
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 24.6 bits (51), Expect = 0.68
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 224 LPVNVPLWLAIMLKQKQKCHVIPPDWMDVEVLENIKEEEK 343
LPV LW I L Q H+ ++ E++EN++ EK
Sbjct: 52 LPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQANEK 91
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 24.6 bits (51), Expect = 0.68
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 224 LPVNVPLWLAIMLKQKQKCHVIPPDWMDVEVLENIKEEEK 343
LPV LW I L Q H+ ++ E++EN++ EK
Sbjct: 90 LPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQANEK 129
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 139 LTNKLDFIRFHYYFYGFNN 83
+TN LDF YYFY ++N
Sbjct: 21 MTNVLDF---DYYFYDYSN 36
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 22.2 bits (45), Expect = 3.6
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +1
Query: 409 FSCRRCSQCTRNKDYYQRHL-GYKNV 483
F C +CS NK HL + NV
Sbjct: 17 FKCEKCSYSCVNKSMLNSHLKSHSNV 42
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/40 (27%), Positives = 15/40 (37%)
Frame = +3
Query: 264 SRNKSAMLSLLTGWTWKFWRILKKRKSVPDSSQRCQMNTI 383
S N + T + W FW D QR +NT+
Sbjct: 206 SYNSDIFAMIGTIFLWLFWPSFNSAALEGDDQQRAIINTL 245
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.2 bits (45), Expect = 3.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 186 YILSWVKFGVILII 145
Y+LSW +GV+ +I
Sbjct: 283 YVLSWTPYGVMSMI 296
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 165 TLPMIKYT*YAVNLVRFVLVYL*TYHSGWLS 257
T P I + N+++FV V TY W S
Sbjct: 498 TTPAICVGVFTFNIIKFVPVKYLTYEYPWWS 528
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 165 TLPMIKYT*YAVNLVRFVLVYL*TYHSGWLS 257
T P I + N+++FV V TY W S
Sbjct: 551 TTPAICVGVFTFNIIKFVPVKYLTYEYPWWS 581
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 119 EIEFIGENRIISITPNFTHDKIYL 190
E+ FI N I + PN DK+ L
Sbjct: 620 ELLFINNNYINLVRPNTFTDKVNL 643
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 409 FSCRRCSQCTRNKDYYQRHL 468
+ C C + K+ YQ HL
Sbjct: 62 YQCLLCQKAFDQKNLYQSHL 81
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 507 ASIDVRNLDILISQMSLIIVFISGALG 427
A++DV N DI+ + ++II + +G
Sbjct: 174 ATLDVYNADIMAATSNVIIASMQYRVG 200
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 507 ASIDVRNLDILISQMSLIIVFISGALG 427
A++DV N DI+ + ++II + +G
Sbjct: 174 ATLDVYNADIMAATSNVIIASMQYRVG 200
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,902
Number of Sequences: 438
Number of extensions: 3478
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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