Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i15
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q03774 Cluster: tRNA (guanine-N(7)-)-methyltransferase-...    36   0.73 
UniRef50_UPI00015B5977 Cluster: PREDICTED: similar to ENSANGP000...    35   1.7  
UniRef50_UPI0000DB6F29 Cluster: PREDICTED: similar to CG9590-PA;...    35   1.7  
UniRef50_Q54RM2 Cluster: Origin recognition complex subunit 1; n...    35   2.2  
UniRef50_Q6BJF0 Cluster: Similar to CA3737|CaBLM3 Candida albica...    35   2.2  
UniRef50_Q54Y58 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q9VF39 Cluster: CG9590-PA; n=4; Sophophora|Rep: CG9590-...    33   9.0  

>UniRef50_Q03774 Cluster: tRNA
           (guanine-N(7)-)-methyltransferase-associated WD repeat
           protein TRM82; n=2; Saccharomyces cerevisiae|Rep: tRNA
           (guanine-N(7)-)-methyltransferase-associated WD repeat
           protein TRM82 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 444

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +2

Query: 14  IFSLVNSYLLAYVLLKSNSFEMATSDSEDFESADEGQNTPIKKDRKERLSSSNYTENSR 190
           +F+++ + +L++     N +E A   S+DF+   E +NT  K+ + +  SS N  EN +
Sbjct: 19  VFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQ--SSENENENKK 75


>UniRef50_UPI00015B5977 Cluster: PREDICTED: similar to
           ENSANGP00000016987; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000016987 - Nasonia
           vitripennis
          Length = 710

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +2

Query: 623 VDSILTTATAGISTLTNQVSQG 688
           V S + TATAG+STLTN V+QG
Sbjct: 314 VSSFINTATAGVSTLTNHVTQG 335



 Score = 33.1 bits (72), Expect = 6.8
 Identities = 15/42 (35%), Positives = 28/42 (66%)
 Frame = +2

Query: 77  MATSDSEDFESADEGQNTPIKKDRKERLSSSNYTENSRELDH 202
           MATS+S+DFESADE  N   ++  + +  +S  +++  ++D+
Sbjct: 1   MATSESDDFESADEELNARTEQAARSKRYTSIGSDSDDDVDY 42


>UniRef50_UPI0000DB6F29 Cluster: PREDICTED: similar to CG9590-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9590-PA
           - Apis mellifera
          Length = 469

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +2

Query: 623 VDSILTTATAGISTLTNQVSQG 688
           V S++ TATAG+STLT+ VSQG
Sbjct: 114 VSSLINTATAGVSTLTSHVSQG 135


>UniRef50_Q54RM2 Cluster: Origin recognition complex subunit 1; n=1;
           Dictyostelium discoideum AX4|Rep: Origin recognition
           complex subunit 1 - Dictyostelium discoideum AX4
          Length = 631

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 62  SNSFEMATSDSEDFESADEGQNTPIKKDRKERLSSSNYTENSRELD 199
           +NS     +D +D+E  DE +N  IK +       +N+T+N+ +LD
Sbjct: 85  NNSTYYEDTDDDDYEDEDEDENHKIKDESDNSEDFNNHTKNTTDLD 130


>UniRef50_Q6BJF0 Cluster: Similar to CA3737|CaBLM3 Candida albicans
           CaBLM3 bleomycin resistance; n=3; Saccharomycetales|Rep:
           Similar to CA3737|CaBLM3 Candida albicans CaBLM3
           bleomycin resistance - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 2205

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = +2

Query: 56  LKSNSFEMATSDSEDFESADEGQNTPIKKDRKERLSSSNYTENSRELDHXXXXXXXXXXD 235
           L++N FEM  +++ED    DE  N    ++  E  S S Y E   + +            
Sbjct: 178 LETNLFEMNNANNEDISMDDESSNYFAVEEFAE--SDSEYEEEEEDEEGDEGDEGEGNES 235

Query: 236 TVKNKEEPKSS 268
           TV++K+ PKS+
Sbjct: 236 TVQHKKSPKSA 246


>UniRef50_Q54Y58 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 696

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +2

Query: 14  IFSLVNSYLLAYVLLKSNSFEMATSD-SEDFESADEGQNTPIKKDRKE--RLSSSNYTEN 184
           +F ++NS++ ++ L+K   F M  +   +DFE+ DE  N  IKK+ K+  ++S    +EN
Sbjct: 34  VFKILNSFIFSFYLIKF--FLMGYNYFRDDFENEDEKPNKDIKKETKKISKISDLLNSEN 91

Query: 185 SRE 193
             E
Sbjct: 92  DNE 94


>UniRef50_Q9VF39 Cluster: CG9590-PA; n=4; Sophophora|Rep: CG9590-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 460

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 623 VDSILTTATAGISTLTNQVSQG 688
           + S+LTTAT G+ T+T QV+QG
Sbjct: 88  LSSVLTTATEGLGTITTQVNQG 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,824,119
Number of Sequences: 1657284
Number of extensions: 12084695
Number of successful extensions: 35356
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35290
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)