Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i15
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 631 GVYTPSPTPAPGSA 590
           G+Y  SP PAP SA
Sbjct: 5   GIYEESPPPAPQSA 18



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 616 SPTPAPGSAGCRGV 575
           +P P PGS G  GV
Sbjct: 211 TPYPPPGSLGSMGV 224


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 467 LVPNHQNHPNRYLYSLFL 414
           ++P  QN+ N YL+SL L
Sbjct: 35  MLPYPQNYINSYLFSLSL 52


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 157 SLFSILFYRCILSLVGTFKIFTITCSHF 74
           +LF+ +F  C++ + G   +  +TC +F
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNF 260


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 157 SLFSILFYRCILSLVGTFKIFTITCSHF 74
           +LF+ +F  C++ + G   +  +TC +F
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNF 260


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 543 LIFKRLQKS*PTPRQPALPGAGV 611
           LIF++ + +  TPR+P + G  V
Sbjct: 91  LIFEKCELATCTPREPGVAGGDV 113


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 305 FHHHQYQNHPNRQKI*VPLCFSQCR*MKIVF 213
           FHH +Y + P R +I   L  S+ R +KI F
Sbjct: 107 FHHGKYLSRPRRIQIAENLNLSE-RQIKIWF 136


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 305 FHHHQYQNHPNRQKI*VPLCFSQCR*MKIVF 213
           FHH +Y + P R +I   L  S+ R +KI F
Sbjct: 98  FHHGKYLSRPRRIQIAENLNLSE-RQIKIWF 127


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 547 YSRGYRKASQHHDNQHYRGLGLGMECRLHIDY 642
           + R     + HH N + R    G++  L +DY
Sbjct: 367 FHREREPVADHHANLYSRPGDSGLDLFLSVDY 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,509
Number of Sequences: 336
Number of extensions: 3530
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)