Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i15
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     29   0.14 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.0  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.3  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 QTNSDSANTTGNKINIS*YSRGYRKASQHHDNQHYRGLGLGM 618
           Q  S  AN+ G+  N S  S  + +A  HH N H+ GLGLGM
Sbjct: 330 QRQSAQANS-GSSNNSS--SHSHSQAQPHH-NPHHIGLGLGM 367


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 302 HHHQYQNHPNRQ 267
           HHHQ  +HP+ Q
Sbjct: 99  HHHQLPHHPHHQ 110


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 302 HHHQYQNHPNRQ 267
           HHHQ  +HP+ Q
Sbjct: 99  HHHQLPHHPHHQ 110


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 495  NQFRLSQHDRKQNQYILIFKRLQKS 569
            NQ +  Q DRK N Y+   KR  K+
Sbjct: 3045 NQGKQDQEDRKVNPYLKHHKRQTKT 3069


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 459 GDKMIIRLRIPTNQFRLSQHDRK--QNQYILIFKRLQKS*PTPRQPALP 599
           GD+M + L +P  QF+L +  R+      + I   +++  P+  +  LP
Sbjct: 347 GDRMSMILFLPNEQFQLDRELRRFTAQDLLTILTEIEQDEPSKVKLQLP 395


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 302 HHHQYQNHPNRQKI*VPLCF 243
           HHH + +H  +Q    P C+
Sbjct: 187 HHHHHPHHSQQQHSASPRCY 206


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 495  NQFRLSQHDRKQNQYILIFKRLQKS 569
            NQ +  Q DRK N Y+   KR  K+
Sbjct: 3048 NQGKQDQEDRKVNPYLKHHKRPTKT 3072


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 631 GVYTPSPTPAPGSAGCRG 578
           G+Y P P P   S  C+G
Sbjct: 50  GIYIPPPVPPYCSTECKG 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,796
Number of Sequences: 2352
Number of extensions: 12634
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)