Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i15
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine re...    27   9.8  

>Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical
           protein F18E2.4 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 202 VVQFPTIFGIIRGR*SLFSILFYRCILSLVGTFKIFTITCSHFEGITF 59
           ++  PTI+ + R +  L  +  Y+ I+ L  T  + T+TCS F G  F
Sbjct: 49  LLYIPTIYMMFRTK--LIHLTCYKIIVCLGVTDMLATLTCSIFSGWLF 94


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 140 FLSVYFVPRRHFQNLHYHL*PFRRNYFLIIHK 45
           F SVYF+     +   Y + PFRR+Y   +HK
Sbjct: 148 FFSVYFLMWPDSETRSYLVIPFRRDYNADVHK 179


>AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine
           receptor, class z protein64 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -1

Query: 581 WCWLAFL*PLEYQD--ILILFPVVLAESELVCRDPQSYYHLVPNHQNHPNRYLY 426
           W W+ ++  + +    +LI   V+L    ++  + + + HL    QNHP RY++
Sbjct: 196 WEWINYIPYVPFYSFHVLIFLSVLLYIPIMI--NIRKHSHLASYQQNHPQRYIF 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,811,200
Number of Sequences: 27780
Number of extensions: 303237
Number of successful extensions: 933
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)