Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i14
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    25   0.88 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          24   1.5  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        24   1.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.7  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   4.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 292 TRDRRKKMGKKRWWSLSRPSPQPLQGPE 375
           T  +RK + KKR + L RP+     GP+
Sbjct: 14  TGGKRKPIRKKRKFELGRPAANTKLGPQ 41


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 528 DPDDNFL-PPSQRNNYACEKDPTGPLNRKKLIE 623
           D D+N + PP + +    + D  GPL+ K  +E
Sbjct: 423 DHDENMIIPPKKSDMSNMQSDDGGPLSLKNKVE 455


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 461 SGRGRAPVQAHSRRTDHAGKGG 526
           S  G +PV +HS    H G GG
Sbjct: 69  SSSGDSPVSSHSSNGIHTGFGG 90


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 267 CLPIDPNTLEAQKSGPLLRHIH*NFHV*GTSS 172
           CL +D  T    +S P++ ++H    + GTSS
Sbjct: 4   CLYLDVYTNSLDQSKPVMFYVHEGAFISGTSS 35


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 464 HFVVCRQLPPVQFGRG 417
           HFVV RQL  VQ G G
Sbjct: 298 HFVVDRQLELVQLGVG 313


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 344 DHHHNHYKDPNYPKIILNKDY 406
           ++ +N+Y + NY K+  N +Y
Sbjct: 312 NYSNNYYNNNNYKKLYYNINY 332


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 344 LDRLHHLFFPIFFL 303
           +DR   + FP+FFL
Sbjct: 423 IDRASRIVFPLFFL 436


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 98  WSLDFANSKYLPVANPPLH 42
           W +DFA +  LP   P +H
Sbjct: 496 WMIDFAKTLPLPQHLPRIH 514


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 98  WSLDFANSKYLPVANPPLH 42
           W +DFA +  LP   P +H
Sbjct: 411 WMIDFAKTLPLPQHLPRIH 429


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 98  WSLDFANSKYLPVANPPLH 42
           W +DFA +  LP   P +H
Sbjct: 730 WMIDFAKTLPLPQHLPRIH 748


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,750
Number of Sequences: 438
Number of extensions: 3965
Number of successful extensions: 32
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)