Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i07
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.10
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 34 0.10
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 34 0.10
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 34 0.10
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 32 0.32
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 32 0.32
AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical ... 32 0.32
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 2.3
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 2.3
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 29 2.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.0
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 28 5.2
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 28 5.2
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81495-8|CAB04063.1| 239|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 9.1
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 9.1
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 9.1
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 9.1
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 9.1
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 9.1
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +3
Query: 234 ATAASQ-KHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYP-YA 407
ATAA + K +T +P A+ + AP A P TAP +PYP A
Sbjct: 2 ATAAEEYKSQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQA 61
Query: 408 LPVSA-FPSQASESLIPCLDPAKANIPQ 488
+P A P+ + +P P A+ PQ
Sbjct: 62 VPAPAPPPAPYPQHAVPAPAPPLASYPQ 89
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYP-YA 407
P A +H P+P ASYP + V AP +AVP AP +PYP +A
Sbjct: 67 PPPAPYPQHAVPAPAPPLASYP-QNAVPVPAPPPAPYP-QHAVP---APAPPPAPYPQHA 121
Query: 408 LPVSA 422
+P A
Sbjct: 122 VPAPA 126
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.10
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 126 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 305
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 306 TVNKKK---QAGAPVQYAYAVPMTTA 374
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.10
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 126 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 305
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 306 TVNKKK---QAGAPVQYAYAVPMTTA 374
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.10
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 126 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 305
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 306 TVNKKK---QAGAPVQYAYAVPMTTA 374
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +3
Query: 294 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 473
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 518 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 577
Query: 474 ANIPQYSPF 500
++ P F
Sbjct: 578 SSAPHLLHF 586
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +3
Query: 294 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 473
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 518 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 577
Query: 474 ANIPQYSPF 500
++ P F
Sbjct: 578 SSAPHLLHF 586
>AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical
protein F46F6.1b protein.
Length = 209
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +3
Query: 294 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 473
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 66 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 125
Query: 474 ANIPQYSPF 500
++ P F
Sbjct: 126 SSAPHLLHF 134
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 306 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 485
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 486 QYS 494
++
Sbjct: 1382 TFA 1384
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 306 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 485
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 486 QYS 494
++
Sbjct: 1382 TFA 1384
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 29.5 bits (63), Expect = 2.3
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Frame = +3
Query: 216 SVNFLPA---TAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 386
SV F P A+ + + PS P E T + PV A+ VPMT+ P
Sbjct: 345 SVPFQPVRQKVASPWRRKLQIPSESNEVDPFETTTSSP----IPVTSAH-VPMTSPPEMM 399
Query: 387 TSPYP---------YALPVSAFPSQASE-SLIPCLD----PAKANIPQYSP 497
TSP P + LP S+F S S +P + P + IP YSP
Sbjct: 400 TSPAPMTSSTSVPQHILPTSSFVSSGSNPDALPATNLFRYPDQVKIPFYSP 450
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 306 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 485
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 486 QYS 494
++
Sbjct: 1382 TFA 1384
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 306 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 485
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 486 QYS 494
++
Sbjct: 1382 TFA 1384
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/127 (22%), Positives = 46/127 (36%)
Frame = +3
Query: 108 PVHGLYIKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAA 287
P L + P + + + TE S + +P A PSP A+
Sbjct: 368 PPRTLPVAPGDPSESTFVQIHETETPSAPSPASPSSVSVTIPRVALPASVSVPSPSP-AS 426
Query: 288 SYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDP 467
+ P T+ A +P Y A + +P P +P S+ PSQ ++ P
Sbjct: 427 NVP--VTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQPAQPTP 484
Query: 468 AKANIPQ 488
+ IP+
Sbjct: 485 SAPKIPE 491
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 126 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 305
I + DLY + E+ G ++ S L S H+T+FPS + S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSEMSES--PDD 128
Query: 306 TVNKKK---QAGAPVQYAYAVPMTTA 374
TV+ KK + A +YA +TTA
Sbjct: 129 TVSGKKTTTRRNAWGNMSYAELITTA 154
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 126 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 305
I + DLY + E+ G ++ S L S H+T+FPS + S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSEMSES--PDD 128
Query: 306 TVNKKK---QAGAPVQYAYAVPMTTA 374
TV+ KK + A +YA +TTA
Sbjct: 129 TVSGKKTTTRRNAWGNMSYAELITTA 154
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 568 TPASFKMLIDFVYADIIWG*KK*NGEYWGMFALAGSKHGIKLSDACDGNA 419
+P + DF+ AD +WG K+ + W ++ GS+ KL + C +A
Sbjct: 324 SPIFVTLFQDFIEADGLWGDKRGISKAW--YSSNGSRVWDKLMETCSEDA 371
>Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical
protein T05F1.2 protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 218 GCIGQPLRFDSIFFCRGNVKVSRRSVDRRLDIESMYWMELIRVVSLSHVTLNTRVNH 48
GCI + ++ S F + + + +LDI+ YW +L + H+ N R+ H
Sbjct: 206 GCIHETAQYLSQF-----INIHDANFVEKLDIDVKYWSQLFSIEKFRHIR-NLRIVH 256
>Z81495-8|CAB04063.1| 239|Caenorhabditis elegans Hypothetical
protein F08G2.8 protein.
Length = 239
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +3
Query: 360 PMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLD-------PAKANIPQYSPFH 503
P+T P E T P + FPS + P D P + ++P ++PF+
Sbjct: 176 PVTVPPQEITQPQSSFTALEIFPSYLPQDKWPQFDQRWMNPQPTQFSVPSFTPFY 230
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 812 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 871
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 872 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 907
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 415 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 474
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 475 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 510
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical protein
C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 775 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 834
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 835 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 870
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 287 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 346
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 347 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 382
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 812 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 871
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 872 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 907
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 415 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 474
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 475 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 510
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 775 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 834
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 835 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 870
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 287 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 346
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 347 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 382
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 415 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 474
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 475 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 510
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.5 bits (58), Expect = 9.1
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 180 EDGVKSQWLTDASVNFLPATAASQKHETAFPS----PFAASYPHE-ETVNKKKQAGAP-V 341
+DGV + LTD + + AS + E+ P P S H T +K + GAP
Sbjct: 754 DDGVSMESLTDDDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGA 813
Query: 342 QYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 449
A A P GT+ +A V F S S S+
Sbjct: 814 PGAPAPPAYGTLTTGTAVNVHATTVELFASARSTSV 849
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,982
Number of Sequences: 27780
Number of extensions: 344919
Number of successful extensions: 1194
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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