Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i06
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.5  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    24   1.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 329 YDEVTVMGPVDCWIE 285
           Y+E  V G + CWIE
Sbjct: 161 YEEKIVKGKLQCWIE 175


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 288 YPAVNWSHHGYFV 326
           YP + W H GYF+
Sbjct: 73  YPVLVWIHGGYFI 85


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 184 KCLKDALNEYIPKLATGLP 240
           K  +D LN YI +LAT +P
Sbjct: 38  KMRRDKLNSYIGELATLVP 56



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 353 GPRTVTSEYDEVTVMG 306
           GPRT ++ Y+ V +MG
Sbjct: 186 GPRTESAVYEPVRIMG 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,193
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)