Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i06
(763 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 48 7e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 24 1.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 5.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 7.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.4
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 48.4 bits (110), Expect = 7e-08
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 169 EKALGKCLKDALNEYIPKLATGLPEYGVPPSEPLIVPSISIQQSTGPITVTSSYSDVTVR 348
+K +C+ +A+ + + LA GL + + P EPL V S+ I +S G +T+ Y ++ +
Sbjct: 37 QKEYNQCIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLY 96
Query: 349 GPSK-MRIKDVQ*D 387
G +K + IK+ D
Sbjct: 97 GLTKNLEIKNYNID 110
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 336 IRVRRSNRDGTS*LLDRNRWNDKRLRWGNP 247
I + N+ T+ + RWND +L+W NP
Sbjct: 71 IEMNLKNQVMTTNVWVEQRWNDYKLKW-NP 99
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 387 VSLDILNSHLRGPSDRNI 334
+++ +LN H R PS N+
Sbjct: 329 ITVCVLNVHFRSPSTHNM 346
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 157 CPREEKALGKCLKDALNEYIPK 222
CP+EE + D L Y+P+
Sbjct: 266 CPQEEACFRLLMNDILRPYVPE 287
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 157 CPREEKALGKCLKDALNEYIPK 222
CP+EE + D L Y+P+
Sbjct: 181 CPQEEACFRLLMNDILRPYVPE 202
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 157 CPREEKALGKCLKDALNEYIPK 222
CP+EE + D L Y+P+
Sbjct: 500 CPQEEACFRLLMNDILRPYVPE 521
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 336 IRVRRSNRDGTS*LLDRNRWNDKRLRWGNP 247
I V N+ T+ + WND +L+W NP
Sbjct: 58 IDVNLKNQIMTTNVWVEQEWNDYKLKW-NP 86
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 564 YFMKYVSKYFLNSLGF 517
Y K+VS+Y++ + GF
Sbjct: 339 YLTKFVSEYWMETRGF 354
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 378 DILNSHLRGPSDRNIRVRRSNRDGTS*LLDRNRWNDKRLRW 256
D+L ++ + I V N+ T+ L W D +LRW
Sbjct: 52 DVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 378 DILNSHLRGPSDRNIRVRRSNRDGTS*LLDRNRWNDKRLRW 256
D+L ++ + I V N+ T+ L W D +LRW
Sbjct: 52 DVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = -3
Query: 455 VIRYLNPERKARLITISRNIIFKSHWTSLIRIFEGPRTVTSEYD 324
+I +L+P+ ++RN+ + T + + PR + D
Sbjct: 671 MIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTD 714
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,346
Number of Sequences: 438
Number of extensions: 4298
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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