Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i05
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   0.96 
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   1.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.1  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 231 RLFRRDGCTKTWSQCRDRTYAGAGSRRWRLWAFQLHP 121
           RL  R G  + W +  D   A   + R+ +WA ++ P
Sbjct: 872 RLEERQGTFQEWQRAWDAAAAAPTASRYAVWAHRMIP 908


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 257 CSCAREDDGDGNERGKDELLARFP*VPRRDHSQLSRGREELQR*TRFT 400
           CS +R+     N+  +  +L R+  VP+ D  Q  RG+ +    T+ T
Sbjct: 378 CSMSRQFRSTFNDLFRPRILDRWMAVPQGDDEQAGRGQHQDAATTQIT 425


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 249 SRNVAVLEKMMETGMNVARMNFSHGSHEYH 338
           +RN+ +   ++E G +V   +  HG++  H
Sbjct: 861 ARNLKITRILLEAGASVREKDLKHGNNILH 890


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,802
Number of Sequences: 2352
Number of extensions: 12773
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)