Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11i05
(680 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g63680.1 68418.m07994 pyruvate kinase, putative similar to py... 138 2e-33
At5g08570.1 68418.m01020 pyruvate kinase, putative similar to py... 136 1e-32
At5g56350.1 68418.m07033 pyruvate kinase, putative similar to py... 132 2e-31
At4g26390.1 68417.m03797 pyruvate kinase, putative identical to ... 127 6e-30
At3g04050.1 68416.m00427 pyruvate kinase, putative similar to py... 125 2e-29
At3g55650.1 68416.m06183 pyruvate kinase, putative simlar to pyr... 124 5e-29
At3g25960.1 68416.m03235 pyruvate kinase, putative similar to py... 124 7e-29
At1g32440.1 68414.m04004 pyruvate kinase, putative similar to py... 96 2e-20
At5g52920.1 68418.m06567 pyruvate kinase, putative similar to py... 92 3e-19
At3g22960.1 68416.m02895 pyruvate kinase, putative similar to py... 80 1e-15
At3g52990.1 68416.m05841 pyruvate kinase, putative similar to py... 76 3e-14
At2g36580.1 68415.m04486 pyruvate kinase, putative similar to py... 75 6e-14
At3g55810.1 68416.m06201 pyruvate kinase, putative similar to py... 74 1e-13
At3g49160.1 68416.m05373 pyruvate kinase family protein similar ... 37 0.011
At5g17170.1 68418.m02012 rubredoxin family protein contains Pfam... 32 0.40
At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase fa... 30 1.6
At2g37440.1 68415.m04592 endonuclease/exonuclease/phosphatase fa... 30 1.6
At5g51920.1 68418.m06441 expressed protein ; expression supporte... 29 2.8
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 27 8.7
At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein / ... 27 8.7
>At5g63680.1 68418.m07994 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 138 bits (335), Expect = 2e-33
Identities = 75/154 (48%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSHEYH ET+ N R A ++ +
Sbjct: 24 IVCTLGPASRSVTMIEKLLKAGMNVARFNFSHGSHEYHQETLDNLRTAMQN------TGI 77
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++LK+G+ I +TT DY KG+ TI + YK +
Sbjct: 78 LAAVMLDTKGPEIRTGFLKDGN--PIQLKEGQEITITT--DYDIKGDEKTISMSYKKLPV 133
Query: 585 VVKPGNRIFIDDGLISIICQSV--SADTLTCTIE 680
VKPGN I DG IS+ S +A T+ C E
Sbjct: 134 DVKPGNTILCADGSISLAVVSCDPNAGTVICRCE 167
>At5g08570.1 68418.m01020 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 136 bits (330), Expect = 1e-32
Identities = 74/154 (48%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR V+++EK+++ GMNVAR NFSHGSHEYH ET+ N R SA +
Sbjct: 24 IVCTLGPASRTVSMIEKLLKAGMNVARFNFSHGSHEYHQETLDNLR------SAMHNTGI 77
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++LK+G+ I +TT DY +G+ TI + YK +
Sbjct: 78 LAAVMLDTKGPEIRTGFLKDGN--PIQLKEGQEITITT--DYDIQGDESTISMSYKKLPL 133
Query: 585 VVKPGNRIFIDDGLISIICQSVSAD--TLTCTIE 680
VKPGN I DG IS+ S + T+ C E
Sbjct: 134 DVKPGNTILCADGSISLAVLSCDPESGTVRCRCE 167
>At5g56350.1 68418.m07033 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 498
Score = 132 bits (319), Expect = 2e-31
Identities = 71/154 (46%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR+V ++EK++ GMNVAR NFSHGSHEYH ET+ N + A L +
Sbjct: 12 IVCTLGPASRSVPMVEKLLRAGMNVARFNFSHGSHEYHQETLDNL------HQAMLNTGI 65
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++LK+G+ ++T S+DY KG+ +TI + YK +
Sbjct: 66 LCAVMLDTKGPEIRTGFLKDG--KPIQLKQGQ--EITISTDYDLKGDENTICMSYKKLAV 121
Query: 585 VVKPGNRIFIDDGLISIICQSVSAD--TLTCTIE 680
V PG I DG IS++ S + T+ C E
Sbjct: 122 DVNPGMVILCADGTISLLVLSCDKENGTVRCRCE 155
>At4g26390.1 68417.m03797 pyruvate kinase, putative identical to
probable pyruvate kinase, cytosolic isozyme (EC
2.7.1.40) [Arabidopsis thaliana] SWISS-PROT:O65595
Length = 497
Score = 127 bits (307), Expect = 6e-30
Identities = 70/154 (45%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR+V ++EK++ GM+VAR NFSHGS+EYH ET+ N R+ A L +
Sbjct: 11 IVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQ------AMLNTGM 64
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++LK+G+ ++T S+DY KG+ TI + YK +
Sbjct: 65 LCAVMLDTKGPEIRTGFLKDG--KPIQLKQGQ--EITISTDYDLKGDEKTICMSYKKLAQ 120
Query: 585 VVKPGNRIFIDDGLISIICQSVSAD--TLTCTIE 680
V PG I DG IS+ S + T+ C E
Sbjct: 121 DVNPGMVILCADGTISLKVLSCDKEKGTVRCRCE 154
>At3g04050.1 68416.m00427 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 510
Score = 125 bits (302), Expect = 2e-29
Identities = 65/137 (47%), Positives = 93/137 (67%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A ++ +
Sbjct: 20 IVCTLGPASRSVEMVEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMEN------TCI 73
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G VEL +G+ ++T S+DY +G+++TI + YK +
Sbjct: 74 PCAVMLDTKGPEIRTGFLKEG--KPVELIQGQ--EITISTDYTMEGDSNTISMSYKKLAE 129
Query: 585 VVKPGNRIFIDDGLISI 635
+K G+ I DG IS+
Sbjct: 130 DLKSGDVILCSDGTISL 146
>At3g55650.1 68416.m06183 pyruvate kinase, putative simlar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 510
Score = 124 bits (299), Expect = 5e-29
Identities = 64/137 (46%), Positives = 90/137 (65%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
IICT+GP SR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A + +
Sbjct: 20 IICTLGPVSRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDN------TGI 73
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++L +G+ ++T S DY +G+++ I + YK +
Sbjct: 74 LSAVMLDTKGPEIRTGFLKEG--KPIQLNQGQ--EITISIDYMIEGDSNVISMSYKKLAE 129
Query: 585 VVKPGNRIFIDDGLISI 635
VKPG+ I DG IS+
Sbjct: 130 DVKPGDVILCSDGTISL 146
>At3g25960.1 68416.m03235 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 497
Score = 124 bits (298), Expect = 7e-29
Identities = 63/137 (45%), Positives = 92/137 (67%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A + +
Sbjct: 20 IVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDN------TGI 73
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTK P IRTG L+ G ++LK+G+ ++T S DY+ +G+++TI + YK +
Sbjct: 74 LCAVMLDTKSPVIRTGFLKEG--KPIQLKQGQ--EITISIDYKIQGDSNTISMSYKKLAE 129
Query: 585 VVKPGNRIFIDDGLISI 635
+KPG+ I DG IS+
Sbjct: 130 DLKPGDVILCSDGTISL 146
>At1g32440.1 68414.m04004 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 571
Score = 95.9 bits (228), Expect = 2e-20
Identities = 54/155 (34%), Positives = 88/155 (56%)
Frame = +3
Query: 213 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 392
R + I+CTIGP+S + ++ K+ E GMNVAR+N SHG H H TI +E + K
Sbjct: 99 RKTKIVCTIGPSSSSREMIWKLAEAGMNVARLNMSHGDHASHQITIDLVKEYNSLFVDK- 157
Query: 393 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYK 572
++AI LDTKGPE+R+G + + L++G+ T K DT+ V+Y
Sbjct: 158 ----AIAIMLDTKGPEVRSGDV----PQPIFLEEGQEFNFTIKRGVSLK---DTVSVNYD 206
Query: 573 NITNVVKPGNRIFIDDGLISIICQSVSADTLTCTI 677
+ N V+ G+ + +D G++S+ +S ++D + C +
Sbjct: 207 DFVNDVEVGDILLVDGGMMSLAVKSKTSDLVKCVV 241
>At5g52920.1 68418.m06567 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 579
Score = 92.3 bits (219), Expect = 3e-19
Identities = 53/161 (32%), Positives = 88/161 (54%)
Frame = +3
Query: 195 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 374
SK + R + I+CT+GP++ ++ K+ E GMNVARMN SHG H H + I + K
Sbjct: 104 SKPTVRRKTKIVCTVGPSTNTREMIWKLAEAGMNVARMNMSHGDHASHKKVI----DLVK 159
Query: 375 SYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADT 554
Y+A+ ++AI LDTKGPE+R+G L + L G+ T +
Sbjct: 160 EYNAQT-KDNTIAIMLDTKGPEVRSGDL----PQPIMLDPGQEFTFTIE---RGVSTPSC 211
Query: 555 IYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTI 677
+ V+Y + N V+ G+ + +D G++S + +S + D++ C +
Sbjct: 212 VSVNYDDFVNDVEAGDMLLVDGGMMSFMVKSKTKDSVKCEV 252
>At3g22960.1 68416.m02895 pyruvate kinase, putative similar to
pyruvate kinase isozyme A, chloroplast precursor
[Ricinus communis] SWISS-PROT:Q43117
Length = 596
Score = 80.2 bits (189), Expect = 1e-15
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = +3
Query: 213 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 392
R + +ICTIGPA+ LE + GMNVAR+N HG+ ++H IR+ R +
Sbjct: 117 RRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRGVIRSVRRLNEE----- 171
Query: 393 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYK 572
F++AI +DT+G EI G L GG A + + GE T + + TI V Y
Sbjct: 172 -KGFAVAIMMDTEGSEIHMGDL--GGEASAKAEDGEVWTFTVRA-FDSSRPERTISVSYD 227
Query: 573 NITNVVKPGNRIFIDDGLISI-ICQSVSADT-LTCT 674
V+ G+ + +D G++ + + + D CT
Sbjct: 228 GFAEDVRVGDELLVDGGMVRFEVIEKIGPDVKCLCT 263
>At3g52990.1 68416.m05841 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 527
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Frame = +3
Query: 195 SKSSYI-RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAE 371
SKSS+ L+ I+ T+GP SR+V L ++ GM+VAR +FS G +YH ET+ N + A
Sbjct: 21 SKSSFFPALTKIVGTLGPKSRSVEALSGCLKAGMSVARFDFSWGDADYHQETLDNLKVAV 80
Query: 372 KSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNAD 551
+S + KL A+ LDT GPE++ + + LK + LT + D ++ +++
Sbjct: 81 RS-TKKL-----CAVMLDTVGPELQ---VINKSEKAITLKADGLVTLTPNQD--QEASSE 129
Query: 552 TIYVDYKNITNVVKPGNRIFIDDGLIS 632
+ +++ + VK G+ IF+ L +
Sbjct: 130 VLPINFNGLAKAVKKGDTIFVGQYLFT 156
>At2g36580.1 68415.m04486 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 527
Score = 74.5 bits (175), Expect = 6e-14
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Frame = +3
Query: 195 SKSSYI-RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAE 371
SKSS+ L+ I+ T+GP SR+V V+ ++ GM+VAR +FS +YH ET+ N + A
Sbjct: 21 SKSSFFPALTKIVGTLGPKSRSVEVIAGCLKAGMSVARFDFSWCDADYHQETLENLKIAV 80
Query: 372 KSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNAD 551
KS + KL A+ LDT GPE++ + + LK + LT S D ++ +++
Sbjct: 81 KS-TKKL-----CAVMLDTVGPELQ---VINKTEKAISLKADGLVTLTPSQD--QEASSE 129
Query: 552 TIYVDYKNITNVVKPGNRIFIDDGLIS 632
+ +++ + VK G+ IF+ L +
Sbjct: 130 VLPINFDGLAKAVKKGDTIFVGQYLFT 156
>At3g55810.1 68416.m06201 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 492
Score = 73.7 bits (173), Expect = 1e-13
Identities = 50/137 (36%), Positives = 76/137 (55%)
Frame = +3
Query: 225 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 404
I+CT+GP SR+V ++EK+++ AET+ N R A + +
Sbjct: 20 IVCTLGPVSRSVEMIEKLLK------------------AETLDNLRTAMNN------TGI 55
Query: 405 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITN 584
A+ LDTKGPEIRTG L+ G ++L +G+ I T S DY+ +G+++ I + YK +
Sbjct: 56 LCAVMLDTKGPEIRTGFLKEG--KPIQLNQGQEI--TISIDYKIEGDSNIISMSYKKLAE 111
Query: 585 VVKPGNRIFIDDGLISI 635
VKPG+ I DG IS+
Sbjct: 112 DVKPGDVILCSDGTISL 128
>At3g49160.1 68416.m05373 pyruvate kinase family protein similar to
SP|Q92122 Pyruvate kinase, muscle isozyme (EC 2.7.1.40)
(Cytosolic thyroid hormone binding protein) (CTHBP)
{Xenopus laevis}; contains Pfam profile PF00224:
Pyruvate kinase, barrel domain
Length = 710
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 213 RLSGIICTIGP-ASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAK 389
R + I+ TIG A+ + + +++ G +V R+N +HG E I+ R S
Sbjct: 234 RSTHIMVTIGEEATLSETFITDILKAGTSVIRINCAHGDPSIWGEIIKRVRRT----SQM 289
Query: 390 LGSPFSLAIALDTKGPEIRTGLLEGG 467
L P + +D GP++RTG L+ G
Sbjct: 290 LEMP--CRVHMDLAGPKLRTGTLKPG 313
>At5g17170.1 68418.m02012 rubredoxin family protein contains Pfam
profile PF00301: Rubredoxin
Length = 271
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 366 AEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGN 545
A K+ ++ P L + G + TG+ GG +A+ LK G+ + T+S E
Sbjct: 82 ASKTIEVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKSGDQVVYTSSFFGDELWP 141
Query: 546 ADTI 557
AD +
Sbjct: 142 ADKL 145
>At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 398
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 680 FNGTRKSVSADRLTDDRDEAIIDEDSVSWLHDIRYVL 570
F TR S S+ D R E I+D D V WL D+ Y L
Sbjct: 198 FKRTRFSRSSK---DSRPETIMDHDKVIWLGDLNYRL 231
>At2g37440.1 68415.m04592 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 479
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 680 FNGTRKSVSADRLTDDRDEAIIDEDSVSWLHDIRYVL 570
F TR S S+ D R E I+D D V WL D+ Y L
Sbjct: 279 FKRTRFSRSSK---DSRPETIMDHDKVIWLGDLNYRL 312
>At5g51920.1 68418.m06441 expressed protein ; expression supported
by MPSS
Length = 570
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 508 FIVSPFFSSTSAEPPPSKSPVLISGPLVSN 419
F SPF +TS+E PP +P + S L N
Sbjct: 19 FSSSPFHGTTSSEHPPHSTPTVTSATLRRN 48
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 453 LLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLIS 632
++EG A + +KKGE +T S +Y G++++ K V+ P + ++ + L+S
Sbjct: 338 VIEGLEKAVMGMKKGEVALITISPEY-AFGSSES-----KQELAVIPPNSTVYYEVELVS 391
Query: 633 IICQSVSADTLT 668
I + S D T
Sbjct: 392 FIKEKESWDMNT 403
>At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to GB:AAD27896 to endoxylanases gi|1255238
(Thermoanaerobacterium thermosulfurigenes), gi|1813595
(Hordeum vulgare) and others ; contains Pfam profiles
PF00331: Glycosyl hydrolase family 10, PF02018:
Carbohydrate binding domain
Length = 1063
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 456 LEGGGSAEVELKKGETIKLTTSSDYQE-KGNADTIYVDYKNITNVVKPGNRIFIDDGLIS 632
LEG + L + T++ +TSSD+QE + N D V + N++K N F DGL S
Sbjct: 141 LEGPAPGKDLLIRSVTVRSSTSSDFQETEKNTDASNV-FPLALNIIK--NHDF-SDGLYS 196
Query: 633 II---CQSVSADTLTCTIE 680
C S + C +E
Sbjct: 197 WNTNGCDSFVVSSNDCNLE 215
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,787,144
Number of Sequences: 28952
Number of extensions: 275864
Number of successful extensions: 1000
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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