Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11i02
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.27 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.7  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 388 KCTERYAKAKAVNSILRHVAELLHYETSEQ 477
           KC +R   A  V+SILR+ A + H  T  Q
Sbjct: 793 KCAKRRLLASVVDSILRYAAPVWHEATKNQ 822


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 RVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAE--LLHYETSEQLEEL 489
           RV   K  +DL    +         ERY     ++  LR  AE  L  ++   QL+EL
Sbjct: 160 RVRPLKKQLDLEAAWMQPSSTISLVERYDNNAQLSIALRTAAELKLFRFDNQYQLKEL 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,300
Number of Sequences: 2352
Number of extensions: 12936
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)