Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h24
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.4  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   7.6  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 244  HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
            H+   H +C +C +K      +  HC   H E  D+  N +
Sbjct: 918  HRPQSH-ECPVCGQKFTRRDNMKAHCKVKHPELRDRFYNHI 957


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 593 IPGGTGPMGVGNIPGDTVEGPAPS 522
           +PG  GP G   IPG   E   P+
Sbjct: 194 LPGNPGPRGYAGIPGTKGEKGEPA 217


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -2

Query: 602 PGYIPGGTGPMGVGNIPGDTVEGPAPSNAGV 510
           PGY PG  GP G     G      AP   GV
Sbjct: 151 PGY-PGDVGPKGEPGPKGPAGHPGAPGRPGV 180


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 205 NTSTKVWMPSSSSYP 161
           N S K W+P ++ YP
Sbjct: 439 NASVKPWLPLATDYP 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,629
Number of Sequences: 2352
Number of extensions: 11445
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)