Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h24
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 175 3e-44
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 175 3e-44
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 35 0.039
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 35 0.039
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 33 0.21
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 32 0.27
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 31 0.84
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 30 1.1
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 30 1.1
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 30 1.1
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 30 1.1
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 30 1.1
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 30 1.1
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 30 1.1
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 30 1.1
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 30 1.1
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 30 1.5
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical p... 29 1.9
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 1.9
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 1.9
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 1.9
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 29 2.6
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 28 4.5
AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc... 28 4.5
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 4.5
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 28 4.5
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 28 5.9
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 28 5.9
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 28 5.9
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 28 5.9
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 28 5.9
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 27 7.8
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 27 7.8
U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical pr... 27 7.8
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 27 7.8
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 27 7.8
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 175 bits (425), Expect = 3e-44
Identities = 71/86 (82%), Positives = 78/86 (90%)
Frame = +1
Query: 160 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 339
MGRKKKK KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCMQVHKE
Sbjct: 1 MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60
Query: 340 AIDKVPNSLPNRSNIEIEIYGMEGIP 417
IDK+P ++ R NI +EIYGM+GIP
Sbjct: 61 TIDKIPAAVHGRDNIHVEIYGMQGIP 86
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 175 bits (425), Expect = 3e-44
Identities = 71/86 (82%), Positives = 78/86 (90%)
Frame = +1
Query: 160 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 339
MGRKKKK KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCMQVHKE
Sbjct: 1 MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60
Query: 340 AIDKVPNSLPNRSNIEIEIYGMEGIP 417
IDK+P ++ R NI +EIYGM+GIP
Sbjct: 61 TIDKIPAAVHGRDNIHVEIYGMQGIP 86
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.039
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKHFKCHIC 279
C C + F D++ L +H++ +H CH+C
Sbjct: 14 CGICGKYFSDDESLREHRRQRHMTCHMC 41
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 166 RKKKKASKPWCWYCNREFDDEKILIQHQKAKH--FKCHIC 279
R+++ + C CNR + + L +H K KH +K IC
Sbjct: 31 RRQRHMTCHMCLLCNRRIPENETLREHMKNKHNIWKLFIC 70
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKHF---KCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
C +C ++F E L +H++ H C +C++++ + H H I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.039
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKHFKCHIC 279
C C + F D++ L +H++ +H CH+C
Sbjct: 14 CGICGKYFSDDESLREHRRQRHMTCHMC 41
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 166 RKKKKASKPWCWYCNREFDDEKILIQHQKAKH--FKCHIC 279
R+++ + C CNR + + L +H K KH +K IC
Sbjct: 31 RRQRHMTCHMCLLCNRRIPENETLREHMKNKHNIWKLFIC 70
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKHF---KCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
C +C ++F E L +H++ H C +C++++ + H H I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 32.7 bits (71), Expect = 0.21
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 14/74 (18%)
Frame = +1
Query: 163 GRKKKKASKPWCWYCNREFDDEKILIQHQ----KAKH----------FKCHICHKKLYTG 300
G+K + K C YCN+ F L +H +AKH +KC IC K+
Sbjct: 281 GKKPVREKKNVCPYCNKAFVRPAELARHSFVHLRAKHLQSSSTEIPKWKCAICFKEYAHQ 340
Query: 301 PGLSIHCMQVHKEA 342
GLS H VH A
Sbjct: 341 AGLSEHKRTVHGNA 354
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 193 WCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
+C C + +D K K F+C C + L IH + H +A D V ++
Sbjct: 111 YCMECRSKIEDTNSHDCRLKPKLFECTECRESFNFEKNLKIHKILDHLKATDFVRGTI 168
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 190 PWCWYCNREFDDEKILIQHQKAKHFKCHIC 279
P C +C ++F DE+ +H + HF C C
Sbjct: 255 PQCLFCEQKFLDEENRYRHLRKDHFFCQFC 284
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 480 ITVRPFAST*FLFLMFFHIFRGYTFHSINFYF 385
+ V FA FLFL+F +I Y+F + N+YF
Sbjct: 62 LAVLAFADIIFLFLLFPNILANYSFFTFNWYF 93
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKHFK---CHICHKKLYTGPGLSIHCMQVH 333
C C++ F L +H+ HFK C +C K + + L H + H
Sbjct: 53 CSICSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQH 101
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 163 GRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYT 297
GR+K+ S P + CN+ H +K C C KK +T
Sbjct: 404 GREKRSDSAPRAFRCNQFHSPSHETKYHSPSKVLPCSYCKKKTFT 448
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 205 CNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHKEAI 345
C + F E+ L H K + CH C++K + ++H + H+ +I
Sbjct: 406 CGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSKYHQTSI 456
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 244 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
H ++ F+C ICHK L H +VH++ K ++L
Sbjct: 262 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 302
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 223 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 333
++ +L H F C +C K L IH QVH
Sbjct: 15 EDSLLKPHTAGSIFTCVMCSKAFPNAEALQIHTDQVH 51
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 244 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
H ++ F+C ICHK L H +VH++ K ++L
Sbjct: 380 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 420
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 223 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 333
++ +L H F C +C K L IH QVH
Sbjct: 133 EDSLLKPHTAGSIFTCVMCSKAFPNAEALQIHTDQVH 169
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 279
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 KHFKCHICHKKLYTGPGLSIHCM-QVHKEAIDKVPNSLPNRSN 381
K ++C +C T LSIH H A+ ++PNS+ +N
Sbjct: 155 KPYRCDLCRYSTTTKGNLSIHMQSDKHLHAVQELPNSIEFAAN 197
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 178 KASKPWCWYCNREFDDEKILIQHQKAKH---FKCHICHKKLYTGPGLSIHCMQVH 333
KA + C C + FD + L +H+ H F C+ C KK + L+ H H
Sbjct: 51 KAPQFNCRQCRKAFDSIRELAEHEIKNHEDQFNCYHCDKKSESIERLAAHTAHRH 105
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLYTGPGLSIH 318
C CN++F + L +H+K H F+CH C + + ++IH
Sbjct: 317 CPDCNQKFLTPRKLRKHRKMAHVFSRTFQCHFCEEFFISDTAVTIH 362
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 178 KASKPWCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLYTGPGLSIHCMQVHKE 339
K+++ C YCN F +K ++ H++ K + C C K L+ H KE
Sbjct: 296 KSARYSCSYCNLRFHFKKDMLVHERIHTGEKPYSCGYCMKSFAQSQALTAHIRTHTKE 353
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 262 FKCHICHKKLYTGPGLSIHCMQVHKEAID 348
+KC C K+ T GLS H M H++ D
Sbjct: 271 YKCTYCSKRYKTSSGLSNHMMSSHQKISD 299
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 357
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365
Query: 358 NSLP 369
SLP
Sbjct: 366 ISLP 369
>Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical
protein R10E4.11 protein.
Length = 302
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKH 261
C YC R+F K +I+H+K KH
Sbjct: 227 CRYCVRQFRTVKEVIEHEKEKH 248
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 357
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 278 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 336
Query: 358 NSLP 369
SLP
Sbjct: 337 ISLP 340
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 357
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365
Query: 358 NSLP 369
SLP
Sbjct: 366 ISLP 369
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA---KHFKCHICHKKLYTGPGLSIHCMQVHKE 339
C C++ L H+K K F+C C K L +H QVH++
Sbjct: 191 CPKCDKLLSSPSALYTHKKTHGDKTFRCDFCPKTFALKNYLKLHVKQVHEQ 241
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIH 318
C C + F IL H+++ K + CH C K L +H
Sbjct: 106 CTVCGKGFSYFSILESHKRSHTGEKPYNCHFCQKTFAQKATLQVH 150
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +1
Query: 190 PWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 366
P C C + E + ++ H C +C KL+ P + + E D+ N+L
Sbjct: 4 PTCEICEESYRSESRIPKNLNCGHVICPVCASKLFENPEVKCPTCRQPIEVKDRDVNNL 62
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 CWYCNREFDDEKIL----IQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 333
C C+R F L H++ K F CH+C K L H ++H
Sbjct: 166 CSICSRAFHQSYNLAFHMFTHEEHKPFTCHVCSKGFCRNFDLKKHLRKMH 215
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 602 PGYIPGGTGPMGVGNIPGDTVEGPAPSNAG 513
P PG GP G PG G P AG
Sbjct: 138 PAGAPGAPGPQGPSGAPGQDAVGEGPGPAG 167
>Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical
protein ZK892.7 protein.
Length = 202
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 178 KASKPWCWYCNREFDDEKILIQHQKAKHFKCHIC 279
K+ P C YC F + +H+ H K H C
Sbjct: 8 KSEAPICGYCQLTFSQTGSMTRHRDRLHTKNHTC 41
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKAKH-----FKCHICHK 285
C +CN +F + L +H+K H F+CH C +
Sbjct: 415 CSFCNMKFLTPRKLRKHKKMSHVFTKTFQCHFCEE 449
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 157 KMGRKKKKASKPWCWYCNREFDDEKILIQHQKAKH 261
++ R KK P C +C++ F +E L +H KH
Sbjct: 316 QLKRPYKKKVSPQCPFCDKRFRNEFSLKKHFAKKH 350
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 602 PGYIPGGTGPMGVGNIPGDTVEGPAPSNAG 513
P PG GP G PG G P AG
Sbjct: 138 PAGAPGAPGPQGPSGAPGQDAVGGGPGPAG 167
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 169 KKKKASKPW-C-WY-CNREFDDEKILIQHQ----KAKHFKCHICHKKLYTGPGLSIHCMQ 327
+K +P+ C W+ C + FD LI+H+ K F C C ++ L H
Sbjct: 99 RKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFCIRQFSRSDHLQQHLTS 158
Query: 328 VH 333
VH
Sbjct: 159 VH 160
>Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical
protein F34D10.5 protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH 333
C +C + F+D L +H + + +KC C K L H +VH
Sbjct: 163 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 PWCWYCNREFDDEKI--LIQHQKAKHFKCHICHK 285
P C C+R ++ I L +H +HF C +C K
Sbjct: 203 PICGACHRPIEERVIAALGKHWHVEHFVCSVCEK 236
>AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc
finger transcriptionfactor protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH 333
C +C + F+D L +H + + +KC C K L H +VH
Sbjct: 163 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 602 PGYIPGGTGPMGVGNIPGDTVEGPAPSNAG 513
P PG G MGV +PGD GP P + G
Sbjct: 164 PNGPPGYEGQMGVPGLPGD---GPTPGSPG 190
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 PWCWYCNREFDDEKI--LIQHQKAKHFKCHICHK 285
P C C+R ++ I L +H +HF C +C K
Sbjct: 203 PICGACHRPIEERVIAALGKHWHVEHFVCSVCEK 236
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 262 FKCHICHKKLYTGPGLSIHCMQVHKEA--IDKVPNSLPNRSNIEIEIYGMEGI 414
F C IC K LS H MQ H ++ N +P+ + +Y + I
Sbjct: 16 FPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTCNNEIPSNDTLRSHMYRVHNI 68
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 262 FKCHICHKKLYTGPGLSIHCMQVHKEA--IDKVPNSLPNRSNIEIEIYGMEGI 414
F C IC K LS H MQ H ++ N +P+ + +Y + I
Sbjct: 16 FPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTCNNEIPSNDTLRSHMYRVHNI 68
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 602 PGYIPGGTGPMGVGNIPGDTVEGPAPSNAG 513
P PG GP G PG +G AP AG
Sbjct: 141 PAGAPGAPGPAGPDGQPGADGQGGAPGPAG 170
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH 333
C C+R F + L +H++ K F+CH C ++ L H M++H
Sbjct: 251 CDRCSRTFKYQSKLDEHRRTHLGVKPFQCHYCTRQFSQRGALKTH-MRLH 299
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 12/58 (20%)
Frame = +1
Query: 181 ASKPWCWYCNREFDDEKILIQHQK-----------AKH-FKCHICHKKLYTGPGLSIH 318
A P C C R+F ++K L H K H F+C C K+ P L H
Sbjct: 24 AKVPQCQVCKRKFANQKTLRTHMKHITCRPGRSNVVNHKFRCENCEKQFTNKPNLKRH 81
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 187 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHKE 339
KP+ C C + F L QHQ+ K F+C C K LS H + +H +
Sbjct: 124 KPFHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLL-IHSD 178
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 187 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHKE 339
KP+ C C + F L QHQ+ K F+C C K LS H + +H +
Sbjct: 124 KPFHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLL-IHSD 178
>U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical
protein C27A2.7 protein.
Length = 216
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 247 QKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVP 357
Q + +KC CH + GL H VH + + K P
Sbjct: 125 QDQRVWKCVYCHTQFGRRGGLRRHVQMVHMQMMHKCP 161
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 FKCHICHKKLYTGPGLSIH 318
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 262 FKCHICHKKLYTGPGLSIH 318
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 292 YTGPGLSIHCMQVHK-EAIDKVPNSL---PNRSNIEIEIYGMEGIP 417
+ P +H +V + EA DKV N L P R+ +I+ YG+ G+P
Sbjct: 577 HLNPKFQVHAGKVDQLEANDKVKNVLDASPQRTWKDIDGYGVLGVP 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,998,057
Number of Sequences: 27780
Number of extensions: 262371
Number of successful extensions: 1427
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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