Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h23
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   3.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.3  
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           23   7.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 486 NERGETPLHVASIRGDHDQVKKLIDQGQDPDVPDFAGWT 602
           N+R ET LH+A        VK L+  G      D+ G T
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNT 819


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = -1

Query: 596 SSKIRNIRILTLINKLFHLIMVSSNRCDMKRCFATLVALLSCTLSFFCWSRSGWRS 429
           +  +R   + T I+ L ++  VS   C+    F T + + +C++ F       W+S
Sbjct: 33  TENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQS 88


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = -1

Query: 596 SSKIRNIRILTLINKLFHLIMVSSNRCDMKRCFATLVALLSCTLSFFCWSRSGWRS 429
           +  +R   + T I+ L ++  VS   C+    F T + + +C++ F       W+S
Sbjct: 33  TENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQS 88


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +1

Query: 430 LLQPLRLQQKKESVQDNNATSVA 498
           ++QP+ L ++ E+V+D   T+V+
Sbjct: 149 VVQPVSLPEQDEAVEDGTMTTVS 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,080
Number of Sequences: 2352
Number of extensions: 8250
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)