Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h22
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    23   2.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query: 282 IPKLIWAVFNISFLMTHKCWSSWF-INLLWRINFLVILN--KRFWCSRL 145
           +P +I A   +SFLM H+  + +   N++ +  F  I N  +  W  +L
Sbjct: 168 LPNVILACHMLSFLMVHQGETQFVAANVILKTRFKTINNILENLWAKKL 216


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 518 RTSPNLPRACLLIPLNTIPFPENDSATQRLLLNSTLWSLMAI 393
           R SPN  +  L +   +   P   SAT     NS++WS  +I
Sbjct: 183 RDSPNYIKPQLHVSTGSTSSPTIASATYTNSANSSIWSPASI 224


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -2

Query: 246 FLMTHKCWSSWFINLLWRIN 187
           F++TH+ +  WF  +++ ++
Sbjct: 54  FIVTHQAYELWFKQIIYELD 73


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -2

Query: 246 FLMTHKCWSSWFINLLWRIN 187
           F++TH+ +  WF  +++ ++
Sbjct: 54  FIVTHQAYELWFKQIIYELD 73


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -2

Query: 246 FLMTHKCWSSWFINLLWRIN 187
           F++TH+ +  WF  +++ ++
Sbjct: 54  FIVTHQAYELWFKQIIYELD 73


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 108 QFSHQFVTSSMDKGDCTK 161
           Q +  ++   +DKG CTK
Sbjct: 36  QMTRNYLDCVLDKGKCTK 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,291
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)