Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h19
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    43   2e-06
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 388 TYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDL-EELFRFETRPYKLNKLVL 564
           T +LQ L+ ++N+I  I    F +LG L  +D SHNR+  L + LFR ET    L +L +
Sbjct: 295 TKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLFR-ET---GLERLDV 350

Query: 565 ANNNIEELP 591
           ++N + +LP
Sbjct: 351 SHNLLGKLP 359



 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = +1

Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDL-EELFRFETRPYKLNKLVLANN 573
           LQ L+L++N +  +    F    KL+ +D SHNRIS++  +LFRF      L  +  ++N
Sbjct: 274 LQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLG---NLRIVDFSHN 330

Query: 574 NIEELPQDAF 603
            +  LP + F
Sbjct: 331 RLRSLPDNLF 340



 Score = 38.7 bits (86), Expect = 4e-05
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +1

Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLE-ELFRFETRPYKLNKLVLANN 573
           L  L L +N++       F  +  L+ +DLSHN + +L+ + FR  T+  KL  L  ++N
Sbjct: 250 LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFR-NTK--KLQWLDTSHN 306

Query: 574 NIEELPQDAFXXXXXXXXXXXXYNRISNL 660
            I E+P D F            +NR+ +L
Sbjct: 307 RISEIPNDLFRFLGNLRIVDFSHNRLRSL 335



 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLE 513
           L+ LNL  N+I  IA   F  L +LE +DL++N IS L+
Sbjct: 142 LKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLD 180



 Score = 27.9 bits (59), Expect = 0.079
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 418 NNQIERIAGSPFYYLGKLETIDLSHNRISDL-EELFRFETRPYKLNKLVLANNNIEELPQ 594
           ++ ++         L +LE +DLS+NR+ ++ +  F F      L K+ L +N IE + +
Sbjct: 27  SSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLR---SLKKVHLQDNTIEMIHR 83

Query: 595 DAF 603
             F
Sbjct: 84  GTF 86


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 168 VRLQNRVYYQRQRNTPPQ*MSRGSQLPRHCYRNA*KC 278
           V+   R +Y+ +     + +   + +PR CY+N  +C
Sbjct: 556 VKQTERRFYRHRERLVARGIHAEALVPRWCYQNEGEC 592


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 97  LVFLTSLVLVACNCPRENIHSL 162
           LV + ++ +   N PRENI  L
Sbjct: 147 LVIIGNIAMELWNMPRENIEPL 168


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 421 NQIERIAGSPFYYLGKLETIDLSHNRISDLEEL 519
           ++ E+IA   FY+L ++ T+ +S    +  EEL
Sbjct: 309 SEAEKIAKICFYWLNEIPTMPVSIKDQTIKEEL 341


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 320 WVSLLL*KLQGKCRKRI*HY 379
           W S+L+ K    C+K++ +Y
Sbjct: 305 WYSILIKKADSFCKKKLENY 324


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 419 FVKFKSCSLYVYCNNVKFVFGICP 348
           F   + C  Y  CN+ +    +CP
Sbjct: 46  FADAEQCDKYYECNDGQITEKLCP 69


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -1

Query: 404  SCSLYVYCNNVKFVFGICP 348
            +C+ Y  CN  +    +CP
Sbjct: 2248 NCAQYYLCNQGQLQLQVCP 2266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,131
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)