Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h19
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 35 0.012
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 33 0.037
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 32 0.065
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.60
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.60
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.60
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.60
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.60
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.60
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.60
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.60
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.60
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.60
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.60
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 29 0.80
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 2.4
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 26 4.2
SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces... 26 5.6
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 5.6
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 7.4
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 25 7.4
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 9.8
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 34.7 bits (76), Expect = 0.012
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Frame = +1
Query: 172 AFKIECTTNVRGIRLPNECLEAANFPVTVTVTLKNVAEDYYPGDPETRLLGFITSLKITG 351
A ++ T N R+ E E A +T+ L ++ P + R+ G I L +
Sbjct: 3 AHEVSSTKNSEIERIIKEA-EDAGPENALTLDLSHLNLRELPYEQLERIQGRIARLALGH 61
Query: 352 QMPKT-NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRF 528
K+ +L++T RL+ LN+ +N + S L LE +D+S N+I L E F
Sbjct: 62 NFIKSIGPEILKFT-RLRYLNIRSNVLREFPES-LCRLESLEILDISRNKIKQLPESF-- 117
Query: 529 ETRPYKLNKLVLANNNIEELP 591
L L ++ N + ELP
Sbjct: 118 -GALMNLKVLSISKNRLFELP 137
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 33.1 bits (72), Expect = 0.037
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFET 534
+ +LNL++ + +A P + L KL +D+S N I D+ L T
Sbjct: 268 INNLNLSSTSLADVAELPVHTLHKLTFLDISENNIRDIRSLDHLRT 313
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 32.3 bits (70), Expect = 0.065
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 406 LNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNNIEE 585
L L N Q++ + + L +DLSHN ISD+E L + +++L L N I++
Sbjct: 872 LELANVQLKEVPKYIATSMPNLRVLDLSHNYISDIESLKPLQ----MIHRLYLVGNRIKK 927
Query: 586 L 588
+
Sbjct: 928 M 928
Score = 30.7 bits (66), Expect = 0.20
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +1
Query: 367 NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYK 546
+LT L L++L + +N + + G +L L + +NRI +EL + ++
Sbjct: 682 DLTGLSSLIHLRELKVDSNHLWSLDG--IQHLDGLLKLSACNNRI---KELSFTNSNLHR 736
Query: 547 LNKLVLANNNIEELPQ 594
L +L+L NN IEE+ +
Sbjct: 737 LEELLLGNNEIEEIEE 752
Score = 25.0 bits (52), Expect = 9.8
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 364 TNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH-NRISDLEELFR 525
TNL Q L+ L ++NN I ++ F +L L +DL+ NR D+ L R
Sbjct: 770 TNLKASQPMIHLRILRISNNAIHQLEVDQFPHLRTL-YMDLNRFNRPPDIRRLKR 823
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 PGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERI 438
P D E + F+ + IT N + +YT + LNL NN+ +R+
Sbjct: 840 PKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNNEDKRV 885
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 28.7 bits (61), Expect = 0.80
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLAN 570
RLQ L NN+I IA L L+T+ L+ N + ++ +L + P N + N
Sbjct: 64 RLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDN 122
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEEL 519
+L+ L L N + L LETIDLS+N I+++ L
Sbjct: 572 KLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIASL 613
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 475 FLICRGSKKVSQRFSQFDYLSN-LNPVAYMYIAIMSNSFSAF 353
F++ G+ K FS D N NP +Y Y A + SF F
Sbjct: 559 FVVANGAGKGGFDFSFVDSEGNSYNPTSYAYTATCTESFLPF 600
>SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 257
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 139 PRENIHSLGQCAFKIECTT--NVRGIRLPNECLEAANFPVTVTVTLKNVAEDYYPGDPE 309
P ++ H+L FK++C + NV + N+ + ANF + + K ++ + G+ E
Sbjct: 83 PSQDYHNLESSPFKLQCDSPYNVPPENMFNQNPDFANFFQAMLQSAKEGSDTNFQGENE 141
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 179 LKAHCPKLWMFSRGQLQATNTRLVRKTK 96
L AHCP LW +S+ +A + L KT+
Sbjct: 68 LFAHCPLLWKWSKVHEEAFDDFLRYKTR 95
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 187 TRF*RRTVLSCGCSHEGSCRLP--IPGWSGKPKV 92
TRF R L+ C+ G+ RLP + G+S P+V
Sbjct: 205 TRFKARITLTVCCNASGTERLPLWVIGYSQSPRV 238
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +1
Query: 361 KTNLTLLQYTYRLQDLNLTNNQIERIAGSPFY-------YLGKLETIDLSHNR 498
KT+++L Y + D + +N+I +I+ P Y YLG L + S R
Sbjct: 237 KTSISLELYLLEMMDFSPLDNEIVKISFEPLYICLQVHSYLGLLSSFRSSFER 289
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 265 TLKNVAEDYYPGDPETRLLGF 327
T+K V ED Y G+P R G+
Sbjct: 506 TIKEVLEDNYGGEPAGRAKGY 526
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,563,116
Number of Sequences: 5004
Number of extensions: 51310
Number of successful extensions: 160
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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