Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h19
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 38 0.006
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 38 0.007
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 36 0.030
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 33 0.16
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 33 0.21
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12) 33 0.28
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 33 0.28
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 32 0.37
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 31 0.64
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.64
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07) 31 1.1
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 31 1.1
SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 29 2.6
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 29 2.6
SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2) 29 3.4
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 29 3.4
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 28 5.9
SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 28 5.9
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 385 YTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVL 564
Y + L+ L + NN++ + + F YL +L+ +DLSHN++ L E +N +
Sbjct: 105 YLFHLETLFINNNKLRELPDT-FCYLARLQKLDLSHNQLLHLPENIGLMESLLSIN---V 160
Query: 565 ANNNIEELP 591
+ N +E LP
Sbjct: 161 SYNELEALP 169
Score = 35.5 bits (78), Expect = 0.039
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +1
Query: 352 QMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFE 531
+ P+ L++ ++ + LN N I + YL L +DLS+NRI L + F +
Sbjct: 48 EFPQDLLSVYSVSF-YEKLNFAFNCITAVPYEFSMYLPHLVHLDLSYNRIGFLPDSFGY- 105
Query: 532 TRPYKLNKLVLANNNIEELPQDAFXXXXXXXXXXXXYNRISNL 660
+ L L + NN + ELP D F +N++ +L
Sbjct: 106 --LFHLETLFINNNKLRELP-DTFCYLARLQKLDLSHNQLLHL 145
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDL 510
+L LNL+NN IE IA F L L+ +DL HN++S +
Sbjct: 162 QLVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKLSTI 200
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 352 QMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEE 516
Q+P N+ L L+DL L NN I + F Y L T+++ +N I + E
Sbjct: 650 QIPTINVGELNVFTGLRDLFLQNNNITELGKDLFKYNTVLGTLNIDNNAIQVVHE 704
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLE--ELFRFETRPYKLNKLVLAN 570
L+ L N+++ I + ++ L LE + + +N+I + L F +L L L+N
Sbjct: 112 LEKFILIENELDWIPDN-WFDLPNLEYMSVDNNQIDRISYPNLEPFFQNRSQLVHLNLSN 170
Query: 571 NNIEELPQDAFXXXXXXXXXXXXYNRISNL 660
N IE + +AF +N++S +
Sbjct: 171 NAIESIASEAFSQLIHLKVLDLRHNKLSTI 200
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 35.9 bits (79), Expect = 0.030
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 373 TLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRIS-DLEELFRFETRPYKL 549
T ++ L+ LNL NN+I I+ F L LE +DLS+N IS +EE+ L
Sbjct: 150 TTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTVEEMNGPFRGLTNL 209
Query: 550 NKLVLANNNIEELPQDAF 603
L L N I + AF
Sbjct: 210 ASLRLDGNRITAIAATAF 227
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANN 573
+LQ LNL N++ I + F +L L+ ++L++NRI + + + R L L L+NN
Sbjct: 133 KLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLR--SLEGLDLSNN 190
Query: 574 NI 579
+I
Sbjct: 191 DI 192
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANN 573
+LQ L L N ++ + Y + LE +++S N I+ L + R +LN L N
Sbjct: 220 KLQVLYLQENALDSVPAQ-VYGIQSLEILNISSNNITSLSDEIRLLRNLVELN---LNKN 275
Query: 574 NIEELPQD 597
NI+ELP D
Sbjct: 276 NIQELPYD 283
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
L+ LNL N++ + S F L L ++DLS NR+S L E FE L L L N
Sbjct: 94 LRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPE-DTFEGLS-SLQDLFLDFNR 151
Query: 577 IEELPQDAF 603
+ +P+ F
Sbjct: 152 LRAIPETTF 160
Score = 35.5 bits (78), Expect = 0.039
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 406 LNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDL-EELFRFETRPYKLNKLVLANNNIE 582
L+L NN I I + F L L +++L NR+S L +FR L L L+ N +
Sbjct: 73 LSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLA---SLRSLDLSANRLS 129
Query: 583 ELPQDAFXXXXXXXXXXXXYNRI 651
LP+D F +NR+
Sbjct: 130 SLPEDTFEGLSSLQDLFLDFNRL 152
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYK-LNKLVLANN 573
L+ LNL N+I ++ S F L LE +DL R +DL+ L R +P K L +L L +N
Sbjct: 119 LKQLNLGENKIRTVSASMFKGLVSLEKLDL---RFNDLKALPRGVFKPLKSLRELFLHDN 175
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
L+ L++ NN + + + L+ +DLS N IS + F KL KL+L NN
Sbjct: 241 LEVLHINNNSLTTVPLHALRKVKFLKELDLSANLISYVSST-AFANNS-KLQKLLLHNNT 298
Query: 577 IEELPQDAF 603
I + +DAF
Sbjct: 299 IRLIHEDAF 307
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
L DL ++ + ++ + + F L+ +DLS+N ISD+++ FE Y L +L L N
Sbjct: 71 LGDLTVSRSPLKLLKNTSFQDYQYLKWLDLSNNDISDIQD-GTFENLRY-LKQLNLGENK 128
Query: 577 IEELPQDAF 603
I + F
Sbjct: 129 IRTVSASMF 137
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLE 513
L++L+LT N I I F L KLE +++S NRIS E
Sbjct: 94 LRNLSLTFNNIHTIRARGFAGLNKLEYLNMSDNRISTWE 132
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANN 573
RL+ LNL NNQI + S + L ++L N + + E+ T+ KL L+L++N
Sbjct: 145 RLRWLNLQNNQITNLPSS-LADMNGLCYLNLEANELKIVPEVV---TKLEKLQVLILSDN 200
Query: 574 NIEELPQD 597
I LP D
Sbjct: 201 EIGALPAD 208
>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
Length = 139
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANN 573
RL+ LNL NNQI + S + L ++L N + + E+ T+ KL L+L++N
Sbjct: 44 RLRWLNLQNNQITNLPSS-LADMNGLCYLNLEANELKIVPEVV---TKLEKLQVLILSDN 99
Query: 574 NIEELPQD 597
I LP D
Sbjct: 100 EIGALPAD 107
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 379 LQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRIS 504
LQ L +L L NN I IA F L L++++L HN IS
Sbjct: 124 LQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNIS 165
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = +1
Query: 370 LTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKL 549
LT L Y L+ LNL+ N+I + G L KL +DLS+N I ++ L Y L
Sbjct: 74 LTSLGY---LRVLNLSCNRIYLVEG--LENLRKLTKLDLSYNFIENVSGLKDLHGNGYSL 128
Query: 550 NKLVLANNNIEEL 588
L L N I L
Sbjct: 129 TTLYLHGNRIASL 141
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
++ LN ++N IE I + L +LE +DLSHN++ + + + KL LANN
Sbjct: 972 IESLNWSHNCIEEI--NHLESLSELEVLDLSHNKLRAIPT--NLNAKLGNIRKLNLANNQ 1027
Query: 577 I 579
+
Sbjct: 1028 L 1028
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
L +L + N + ++ S F + L+ ++L N I L E F KL + L+ NN
Sbjct: 135 LTELRIDENDLSELSVS-FTLMKNLKVLELGDNHIERLPEDFG---NLRKLEVVNLSQNN 190
Query: 577 IEELPQDAFXXXXXXXXXXXXYNRISNL 660
IE+LP ++F N I NL
Sbjct: 191 IEKLP-ESFGFLCCLKSFDITGNHIENL 217
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.5 bits (68), Expect = 0.64
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Frame = +1
Query: 133 NCPRENIHSLGQCAFKIECTTNVRGIRLPNECLEAANFPVTVTVTLK---NVAEDYYPGD 303
N +N+H+L + F ++ + N+ I L N L + T+ L +V+ +
Sbjct: 323 NWGHKNLHALHKAWF-VDYSLNLVRIDLANNSLHELPEELLNTLPLLEELDVSNNNLVSL 381
Query: 304 PETRLLGFITSLKITGQMPKTNLTLLQYTY----RLQDLNLTNNQIERIA------GSPF 453
PE L F++ K+ Q + NLT + + L LNL++N++ + GS
Sbjct: 382 PEVSNLSFMSLEKLFAQ--RNNLTWVSSSLFQLKTLNKLNLSHNKLTMLGEEDTDLGSQG 439
Query: 454 YY-LGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNNIEELP 591
+ L+ + ++HN + L F ++ L KL L+NN ++E P
Sbjct: 440 WMRCTSLKVLKVTHNLLESLP--FGIQSAS-SLVKLFLSNNKLKEFP 483
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEE-LFRFE--TRPYKLNKLVLA 567
LQ LNL N + + P L +D+SHNR+ L E +F E Y N L+ A
Sbjct: 112 LQTLNLNCNALTTVP--PLRNAKNLARLDISHNRLESLPEGIFNLELIAEIYAANNLIQA 169
Query: 568 NNN 576
N
Sbjct: 170 LGN 172
>SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07)
Length = 218
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 310 TRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQI---ERIA-GSPFYYLGKLET 477
+ L+G ++ K+ + +LQY L LNL+NN + + +A F KL
Sbjct: 71 SELVGDLSCNKLGSSGCQALSDMLQYNVSLLKLNLSNNNLSDKDTVALLETFKGNEKLLW 130
Query: 478 IDLSHNRISD 507
+DLSHNR S+
Sbjct: 131 LDLSHNRFSE 140
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 349 GQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFR- 525
GQ+ + T +L+ L LTNN+I I +L T+DLS N L+ +F+
Sbjct: 57 GQITELKKTSFLDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNL---LKRVFKH 113
Query: 526 FETRPYKLNKLVLANNNIEELPQDAF 603
+ + L + L+ N IE + ++AF
Sbjct: 114 YFSGLEDLKSVNLSRNVIECVEREAF 139
>SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRI 501
L++L+LT I ++ FY+ G +E + L+H RI
Sbjct: 263 LRNLHLTEKDINGLSAYFFYHPGDVEIMSLAHERI 297
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHN 495
++ L L NN I IA F L KL T+DLS N
Sbjct: 58 VESLILKNNSIRSIAKGAFNGLDKLLTLDLSSN 90
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 394 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFET 534
RL+ + L NN++ R+A L LE+I L++N + +L++L E+
Sbjct: 555 RLKTILLNNNRVCRVAEGLGECLPNLESIILTNNAMQELKDLEPLES 601
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNN 576
L+ L+L N+I +I L L T+D+SHN I +L P +++ + NN
Sbjct: 247 LERLSLRENKI-KILPRVIGQLVHLVTLDISHNHIENL---------PAGIDEFNIEGNN 296
Query: 577 IEELPQ 594
I ELP+
Sbjct: 297 IAELPE 302
>SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2)
Length = 298
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 138 PS*EHPQLRTVRLQNRVYYQRQRNTPPQ*MSRGSQ 242
PS HP L V L+ +YY R + PP S SQ
Sbjct: 243 PSQYHPLLHPVHLRTTLYYIRSISEPPSTTSSPSQ 277
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 138 PS*EHPQLRTVRLQNRVYYQRQRNTPPQ*MSRGSQ 242
PS HP L V L++ +YY + + PP S SQ
Sbjct: 211 PSQNHPLLHPVHLRSTLYYIQSISVPPLTTSSPSQ 245
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRI--SDLEELFRFETRPYKLNKLVLAN 570
L++L + N I Y G LE +DLS+NR+ +D+ L E L L L
Sbjct: 63 LRELEMPLNNISGNIHLETYDFGHLEKLDLSYNRLTGADILALGLME----NLRTLHLTG 118
Query: 571 NNIEELP 591
N I LP
Sbjct: 119 NEIRRLP 125
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +1
Query: 379 LQYTYRLQDLNLTNNQIERIAGSPFY----YLGKLETIDLSHNRISDL--EELFRFETRP 540
L Y + +LNL+ NQI R + LE +DLS N D E+L R
Sbjct: 243 LSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDDFGTEDLMEALKRN 302
Query: 541 YKLNKLVLANNNIEE 585
L L L+NN + +
Sbjct: 303 TSLIVLNLSNNRLTD 317
>SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36)
Length = 852
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 397 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISD 507
LQ LNL+ N I + + + L ++DLS+NR+S+
Sbjct: 647 LQTLNLSGNNISEVK-TLAQFPSSLSSLDLSNNRLSE 682
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,865,775
Number of Sequences: 59808
Number of extensions: 371218
Number of successful extensions: 919
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -