Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h18
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    26   0.25 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.44 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.4  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 368 IFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVI 532
           I +LIL      +V +  I +A +LLY+ +   +   TK+ I  +KE+V   N I
Sbjct: 61  ILKLILAKYRQQDVTLLQITKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDI 115


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 51  ISLRSVIN*-IIRFQVYSKFSYIYYILN*FEVIKPIYR--HKIL 173
           I L+SV+   II  ++YS+F Y + I    + IK  YR  H++L
Sbjct: 121 ILLKSVLEIVIIDIEIYSQFLYGFMIYLILDTIKSKYRQMHRLL 164


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 572 LTTYAVNLFCAHAYYL 619
           L TY + LF  HA+YL
Sbjct: 439 LVTYELTLFQYHAFYL 454


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 583 ICCELFVMHVVWIIQYFN 530
           I CELF + ++WI  + N
Sbjct: 134 ITCELFFVILLWISFFLN 151


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 532 NDIVNGDVFFNVFNACFSQMFQ 467
           ++I+ GD F+N  N  F + ++
Sbjct: 393 SNILTGDQFYNFLNHNFDRHYE 414


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 574 ELFVMHVVWIIQYFNDIVNGDVFFNV 497
           + F+   V +  YF  +V GD  F +
Sbjct: 373 QAFIRKHVELAHYFESLVRGDERFEI 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,914
Number of Sequences: 336
Number of extensions: 3145
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)