Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h18
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 57 1e-08
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 55 6e-08
SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28) 54 1e-07
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 51 8e-07
SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 46 4e-05
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23) 42 5e-04
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 42 5e-04
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 41 8e-04
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.002
SB_9442| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 39 0.003
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 38 0.008
SB_33388| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 31 1.1
SB_56278| Best HMM Match : BTB (HMM E-Value=8.5e-05) 29 2.7
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 29 4.6
SB_13356| Best HMM Match : BACK (HMM E-Value=5.1e-16) 29 4.6
SB_49197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 28 6.1
SB_15596| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 28 8.1
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +2
Query: 329 KKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKE 508
+K + L ++P++FQ +L ++YT N A DLL A+ KY LE L C + +
Sbjct: 260 RKGRVEILDIDPDVFQEMLKFVYTGNTPQIQ-GMADDLLAAADKYDLERLKVMCEDVLCS 318
Query: 509 NVTIDNVIEVLNYPDYMHDKQLTTYAVNLFCAHA 610
N+T++NV +VL D + QL + A++ +HA
Sbjct: 319 NLTVENVCDVLILADMHNATQLKSQALDFVNSHA 352
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 383 LNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDYMH 562
L Y+Y + V T +E A LY S+KYL+ L K C+ YI++NVT V +VL Y +
Sbjct: 90 LRYLYCNRVKFT-MESAIQALYLSKKYLVPSLAKHCVTYIRDNVTPQIVFDVLPYALKLA 148
Query: 563 DKQLTTYAVNLFCAHAYYL 619
+K + L HA L
Sbjct: 149 EKDILDRCFELVDFHAVTL 167
>SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28)
Length = 436
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +2
Query: 359 EPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
E E F +L Y+YTD +T ++ A +LY +KYLL L C ++++++ DN + V
Sbjct: 82 EEECFTELLRYVYTDKCLLT-LDNALGVLYLGKKYLLSVLVNKCAAFVEKHLNPDNALTV 140
Query: 539 LNYPDYMHDKQLTTYAVNLFCAHAYYLFQ 625
L + Y+ +K L ++ H + Q
Sbjct: 141 LCHSRYLGEKCLEEKCWDIIDVHTAKVLQ 169
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
+EP F +L ++YTD V I E LY ++KY + L K C++++K+N+ DN
Sbjct: 1658 VEPSAFMALLRFLYTDEVQIGP-ETVMTTLYTAKKYAIPTLEKACVDFLKKNLAPDNAFM 1716
Query: 536 VLNYPDYMHDKQL 574
+L+ + QL
Sbjct: 1717 LLSQARLFDEPQL 1729
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 371 FQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
FQ +L Y+Y D V T + D+LY S+KY++ HL + C +YI+ + D+V VL
Sbjct: 82 FQELLRYLYCDQVVFTG-KNVLDVLYLSKKYIISHLIEKCWDYIERVIGYDDVFHVL 137
>SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 359 EPEIFQLILNYIYTDNVDITSIEQA-FDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
EP F +L Y+Y D V +T+++ DL +RKYL+ HL C +++ N+T+DN +
Sbjct: 123 EPAAFLELLRYLYYDEVQLTTLQHGGMDL---ARKYLIPHLADICTDFLVTNLTVDNSLT 179
Query: 536 VLN 544
VL+
Sbjct: 180 VLD 182
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDYM 559
+L +IYT+ + T I A ++LY ++KY+L L + C EY E + D+V+ VL +
Sbjct: 83 MLRFIYTEEIRFT-INIAVEVLYLAKKYILPCLEERCHEYFNEEMGPDDVLAVLPHAVRQ 141
Query: 560 HDKQLTTYAVNL 595
D++L NL
Sbjct: 142 ADQELQIICWNL 153
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/82 (25%), Positives = 46/82 (56%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
L+P + + IL+++YT ++I + + DLL AS ++ +T C ++++E + ++ +
Sbjct: 87 LKPSVVKEILDFLYTGRIEIDN-KNVRDLLEASSFLIISSVTDKCWQFLEEYLNVETCLI 145
Query: 536 VLNYPDYMHDKQLTTYAVNLFC 601
VL+ D ++ L A+ C
Sbjct: 146 VLSIADEFYNLDLNKKALKFLC 167
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
++P + +++L+++YT VDI S+E LL + L+ L++ C +++ ++ N +
Sbjct: 76 IDPAVMEILLDFVYTGIVDI-SVENVQALLSGATLLNLQTLSQACCSFLQTHLDASNCLG 134
Query: 536 VLNYPDYMHDKQLTTYAVNLFCAH 607
+ + D +L A C H
Sbjct: 135 IRAFADLYSCTELENAAFKYICQH 158
>SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23)
Length = 998
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQ-AFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDY 556
++ ++YTD I E +L++AS KY L+ L C + + +VT+ N I+ +
Sbjct: 819 LMKWVYTDKAQIPKEESFLINLVHASNKYRLKDLRLRCEKILMSSVTVSNCIKFYQTAED 878
Query: 557 MHDKQLTTYAVNLFCAH 607
+ K+L Y + H
Sbjct: 879 IGAKELQKYCAEIISNH 895
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLN 544
E +L Y Y D V++T ++Y + KY+L L + C ++++EN+ +V+ VL
Sbjct: 498 EALSEMLRYAYFDEVELTG-SNVMSVMYLAEKYILPGLNEKCTQFLQENLEAKDVLFVLP 556
Query: 545 YPDYMHDKQLTTYAVNL 595
+ D+ L + L
Sbjct: 557 EAMEIQDENLQRHCWEL 573
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
++ + ++ + YT NV I S E LLYA+ + K C E++++N+ + N +
Sbjct: 73 IDSQSMTTLVEFAYTSNVRINS-ENVETLLYAASMLQFVRVEKACYEFLRKNINVPNCLT 131
Query: 536 VLNYPDYMHDKQLTTYA 586
+ N + +LT A
Sbjct: 132 IWNLAELHGCAELTALA 148
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 38.3 bits (85), Expect(2) = 0.002
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +2
Query: 374 QLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPD 553
+L++++ YT +DIT+ E ++YAS + L + K C E+++ + N + + ++ D
Sbjct: 99 ELLVDFAYTGKLDITT-ENVQSIMYASSLFQLNAIQKACSEFLERQLHPSNCLGIRSFAD 157
Score = 21.0 bits (42), Expect(2) = 0.002
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 305 DCNFCVSGKKFKAHKLIL 358
D CV ++ AH+L+L
Sbjct: 48 DVTLCVGERQIVAHRLVL 65
>SB_9442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
PE+F +++++Y DN ++T E +++L A+ YLL L + C I + NV+ VL
Sbjct: 38 PEVFAAVVSFVYRDNAELTD-EILYNVLCAADIYLLHGLKRLCEHKISGLLDRANVLTVL 96
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
PE+F +++++Y DN ++T E +++L A+ YLL L + C I + NV+ VL
Sbjct: 260 PEVFAAVVSFVYRDNAELTD-EILYNVLCAADIYLLHGLKRLCEHKISGLLDRANVLTVL 318
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
+L Y+Y D V IT++ LY ++KY+L L + C EY + NV+EVL
Sbjct: 52 MLRYLYRDEVIITNV------LYLAKKYILPGLEELCYEYFSRIMGPKNVLEVL 99
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLN 544
E +L Y Y D V +T A ++Y + KY L + C Y++EN+ +V+ VL
Sbjct: 80 EALSEMLRYAYYDEVKLTG-SNAMAVMYLAEKYNFPGLKEKCSHYLQENLEPKDVLFVLP 138
Query: 545 YPDYMHDKQLTTYAVNL 595
+ D+ L ++ L
Sbjct: 139 EAMKIQDENLQSHCWEL 155
>SB_33388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
++ + + IL + YT + + ++ DLL A+ LL LT CIE + +++DN
Sbjct: 102 IKAKAMESILEFFYTQEI-VLEEDELLDLLDAASFLLLPALTDACIELLSSILSVDNCFS 160
Query: 536 VLNYPDYMHDKQLTTYAVNLFCAHAYYL 619
+ + K L + A + YL
Sbjct: 161 IRMIASKYNAKDLLSNADGFIKGNFVYL 188
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +2
Query: 374 QLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPD 553
Q +L+Y+YT +++I + ++L A+ + + + C E++KE + N + +L D
Sbjct: 135 QALLDYVYTSSIEIFD-DNVEEVLNAACAFQIPEIINVCSEFLKEQLHPSNCLGILALAD 193
Query: 554 YMHDKQLTTYA 586
++L A
Sbjct: 194 RFSCEELANEA 204
>SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +2
Query: 371 FQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKEN-----VTIDNVIE 535
F ++L YIYTD+ ++ A ++L + ++ L+ L C ++I ++ V DN
Sbjct: 122 FLILLEYIYTDSCNLKD-TNAREVLVLADRFCLDGLAARCEQFIIDSMPGLGVICDNEEF 180
Query: 536 VLNYPD-YMHDKQLTTYAVNLFCAH 607
V + D +M K + + ++C H
Sbjct: 181 VESILDVFMFAKAFNSQYLTMWCLH 205
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 359 EPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
+P Q I+ Y Y+ + IT E LL A+ + + + C E+I+ + IDN + +
Sbjct: 86 DPVGVQSIVEYFYSKRLTITK-ENIEGLLSAASLFEIPSIVHECGEFIQGEIQIDNCLGI 144
>SB_56278| Best HMM Match : BTB (HMM E-Value=8.5e-05)
Length = 82
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHL 478
++PE+ + +L + YT +++T+ E A +L A+ LLE L
Sbjct: 34 IDPEVTEDVLTFFYTGQIELTT-ENAVAILKAADVLLLETL 73
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 320 VSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEH--LTKTCI 493
++G K K+ +L E E +L+L T N D+ ++ FD+ K +EH + K I
Sbjct: 2120 MAGLKKKSSRLAQEKEDMKLLLEEEQTRNTDLEKKQRKFDIESNHMKQEVEHERMLKDKI 2179
Query: 494 EYIKENVTID 523
KE D
Sbjct: 2180 NREKEKFQAD 2189
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 371 FQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENV 514
F ++L YIYTD+ ++ A ++L + ++ L+ L C ++I +++
Sbjct: 344 FLILLEYIYTDSCNLKD-TNAREVLVLADRFCLDGLAARCEQFIIDSM 390
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/64 (17%), Positives = 32/64 (50%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
P+ + ILN+IYT + + + +L + L++ + C +++ + + N + +
Sbjct: 82 PDSMRSILNFIYTGEI-VLDWDNVELILQGANLMLVQSVKDACCRFLESRLNVSNCLGIQ 140
Query: 542 NYPD 553
++ +
Sbjct: 141 SFSE 144
>SB_13356| Best HMM Match : BACK (HMM E-Value=5.1e-16)
Length = 1155
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
+L + Y+ + + + FD+L A+ +LL+ L C++ + ++IDN ++
Sbjct: 711 VLEFFYSSTITL-DMNTVFDVLDAAC-FLLDTLRFACLDMLASAISIDNCFKI 761
>SB_49197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +2
Query: 455 RKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDYMHDKQLTTYAVNLFCAHAYYLFQRHI 634
R Y L L + C Y K + + N DY +Q+ A + YY +R +
Sbjct: 35 RYYKLRRLLQNCDRYYKLRRLLQIATGITNCDDYYKLRQVLQIATIITNCDRYYKLRRLL 94
Query: 635 QV 640
Q+
Sbjct: 95 QI 96
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 482 KTCIEYIKENVTIDNVIEVLNYPDYMHDKQLTTYAVNLFCAHAYYLFQRHIQVISPLCLK 661
+TC +Y+ + I+ + N+ DY+H K + H LF R + V++ L L
Sbjct: 371 ETCYKYL--GIVINETLNWSNHIDYLHQKMAKRLGMLKRIKHLLPLFSRRL-VVNSLMLP 427
Query: 662 --DC 667
DC
Sbjct: 428 RFDC 431
>SB_15596| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 502
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +2
Query: 368 IFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKE 508
+F+L++N+ + +VDI S+ +++ +YL+ +L + E + E
Sbjct: 134 VFKLLVNFEFNLSVDIDSLVGEGNIVLTDHEYLILNLLRRRSEKVNE 180
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 649 GTNDLNMSLK*IVCMSTEQIHSICCELF--VMHVVWIIQYFNDIV 521
GT + S I C +T + S+ C L+ ++HV ++ + N ++
Sbjct: 750 GTVSITCSASCITCTATFHVSSVMCHLYSVIIHVSSVMFHVNSVI 794
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 338 KAHKLILEP-EIFQLILNY----IYTDNVDITSIEQAFDLLYASRKYLLEH 475
K HKL+ E+FQ + Y D++D ++ F+ ++ S YLLEH
Sbjct: 1442 KIHKLLKNNLELFQADADTDMWRAYVDSIDDMVLDGFFNCIHCSLNYLLEH 1492
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,326,447
Number of Sequences: 59808
Number of extensions: 374445
Number of successful extensions: 768
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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