Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h18
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 42 5e-04
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 41 7e-04
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 35 0.047
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 35 0.047
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 34 0.11
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 33 0.19
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 33 0.19
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 33 0.19
AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical ... 30 1.3
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 30 1.8
AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical ... 29 3.1
AF016655-2|AAK72056.2| 207|Caenorhabditis elegans Hypothetical ... 29 3.1
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 24 5.4
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 24 5.5
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 24 5.5
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 28 7.1
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
+EP F +L ++Y+D V I + E LY ++KY + + K C+ ++K+ + DN
Sbjct: 242 VEPSAFLALLKFLYSDEVKIEA-ESVMTTLYTAKKYAVPAMEKECVRFLKQRLVPDNAFM 300
Query: 536 VLN 544
+L+
Sbjct: 301 MLS 303
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDIT-SIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
E F + + +IYTD +D+ E+ + + + LE L C++ + + +DN I++
Sbjct: 112 EAFHVAIRWIYTDEIDLKMEDEKLLKVCETATSFRLEQLKNVCVQQLGARLHVDNCIKIY 171
Query: 542 NYPDYMHDKQLTTYA 586
+ + +QL+T A
Sbjct: 172 EFAEKQSLRQLSTVA 186
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 368 IFQLILNYIYTD--NVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
I++++ YIY N DIT + A LL A+ KY LE L C +Y+ EN+ I+N +L
Sbjct: 253 IYEMVY-YIYCGRCNKDITDMATA--LLIAADKYRLEELKSHCEKYLVENINIENACSLL 309
Query: 542 NYPDYMHDKQLTTYAVNLFCA 604
D +L AV A
Sbjct: 310 IIGDLYSAPKLRKRAVTYILA 330
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 368 IFQLILNYIYTD--NVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
I++++ YIY N DIT + A LL A+ KY LE L C +Y+ EN+ I+N +L
Sbjct: 253 IYEMVY-YIYCGRCNKDITDMATA--LLIAADKYRLEELKSHCEKYLVENINIENACSLL 309
Query: 542 NYPDYMHDKQLTTYAVNLFCA 604
D +L AV A
Sbjct: 310 IIGDLYSAPKLRKRAVTYILA 330
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
+EPE+ + +L Y+YT + A L+ A+ KY L+ L C + + +T DN
Sbjct: 275 IEPEVMRELLVYMYTGQTKYIE-QMAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASL 333
Query: 536 VLNYPDYMHDKQLTTYAVNLFCAHA 610
L D QL +++N +A
Sbjct: 334 TLMLADMYSASQLRAHSINFINVNA 358
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
+EPE+ + +L Y+YT + A L+ A+ KY L+ L C + + +T DN
Sbjct: 317 IEPEVMRELLVYMYTGQTKYIE-QMAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASL 375
Query: 536 VLNYPDYMHDKQLTTYAVNLFCAHA 610
L D QL +++N +A
Sbjct: 376 TLMLADMYSASQLRAHSINFINVNA 400
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +2
Query: 311 NFCVSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTC 490
N V KK + E ++I++YIYTD + IT + L++ + ++ + C
Sbjct: 142 NGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAIT-MNNVHQLIFTATVLQMDVIVVAC 200
Query: 491 IEYIKENVTIDNVIEVLNYPD 553
+++ +T N + + ++ D
Sbjct: 201 QQFLATMITSHNCMSLYHFSD 221
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +2
Query: 311 NFCVSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTC 490
N V KK + E ++I++YIYTD + IT + L++ + ++ + C
Sbjct: 142 NGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAIT-MNNVHQLIFTATVLQMDVIVVAC 200
Query: 491 IEYIKENVTIDNVIEVLNYPD 553
+++ +T N + + ++ D
Sbjct: 201 QQFLATMITSHNCMSLYHFSD 221
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 350 LILEPEIFQLILNYIYTDNV--DITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTID 523
L P + ++ +IY + DI + QA D++ + KY + L TC +++ + + ++
Sbjct: 272 LDFSPTSVRAMVEFIYAGVIKSDI-DVYQAVDVMQIAEKYQILALKMTCEQHLLDRLNVN 330
Query: 524 NVIEVLNYPD 553
NV+E + + +
Sbjct: 331 NVLECITHAE 340
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
P++F+L LNY+Y+ V I +LL + +L+ L C Y+ + N + +
Sbjct: 88 PQVFELFLNYMYSGTV-IIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYLDAANCLSI 145
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
P++F+L LNY+Y+ V I +LL + +L+ L C Y+ + N + +
Sbjct: 88 PQVFELFLNYMYSGTV-IIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYLDAANCLSI 145
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEV 538
P++F+L LNY+Y+ V I +LL + +L+ L C Y+ + N + +
Sbjct: 88 PQVFELFLNYMYSGTV-IIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYLDAANCLSI 145
>AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical
protein B0281.6 protein.
Length = 212
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAF-DLLYASRKYLLEHLTKTC---IEYIKENVTIDNV 529
P+ F+ +LNYI + +VD+ E +L + Y LE L C + IK T D +
Sbjct: 53 PKHFETVLNYIRSGDVDLPDSENELKELKREAEYYSLEKLATLCQSSMPKIKSYKTADEL 112
Query: 530 IEVL 541
+ ++
Sbjct: 113 LNMI 116
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIE 535
+EP + ++ + YT + I D+L A+ + + C +Y+K+ + N +
Sbjct: 102 IEPPTLEALIEFCYTGAIAIDD-SNVQDILPAACLLQIHEVQTACCDYLKKQLDPSNCLG 160
Query: 536 VLNYPDYMHDKQLTTYA 586
+ + D K+L + A
Sbjct: 161 IRAFADTHSCKELLSSA 177
>AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical
protein T23B12.6 protein.
Length = 670
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 359 EPEIFQLILNYIYTDNVDITSIE 427
+P++F++ILNY+ T VD+ I+
Sbjct: 68 DPDLFRVILNYLRTKQVDLCGIK 90
>AF016655-2|AAK72056.2| 207|Caenorhabditis elegans Hypothetical
protein C17F4.8 protein.
Length = 207
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 362 PEIFQLILNYIYTDNVDITSIEQAF-DLLYASRKYLLEHLTKTCIEYIKENVTI 520
P+ F +ILN++ +VD+ E+ ++ ++ YLLE L C I + +
Sbjct: 55 PKHFDIILNFLRDGDVDLPEQEKEINEVKREAQFYLLEELVDLCHRKINTKIRV 108
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 23.8 bits (49), Expect(2) = 5.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 350 LILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHL 478
L++ P +FQ + I D + + + DLL AS K + +HL
Sbjct: 1154 LVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIAS-KDMEQHL 1195
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 473 HLTKTCIEYIKENVTIDNV 529
H+ K +EY+ VT+D V
Sbjct: 1218 HIAKKEVEYLGHKVTLDGV 1236
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 350 LILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHL 478
L++ P +FQ + I D + + + DLL AS K + +HL
Sbjct: 1068 LVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIAS-KDMEQHL 1109
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 473 HLTKTCIEYIKENVTIDNV 529
H+ K +EY+ VT+D V
Sbjct: 1132 HIAKKEVEYLGHKVTLDGV 1150
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 350 LILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHL 478
L++ P +FQ + I D + + + DLL AS K + +HL
Sbjct: 1057 LVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIAS-KDMEQHL 1098
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 473 HLTKTCIEYIKENVTIDNV 529
H+ K +EY+ VT+D V
Sbjct: 1121 HIAKKEVEYLGHKVTLDGV 1139
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 299 WSDCNFCVSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYA 451
+ + + S + A ++L P I +LN I +NV T IE +L A
Sbjct: 296 FDNLKYATSARTKPAENVLLTPSIICFLLNIIVDENVSNTVIENCKMILKA 346
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 57 LRSVIN*IIRFQVYSKFSYIYYILN*FEVIKPIYRHKILT*FVPLVLGSSSSRWG 221
LR++ N + RF + ++ FEVIK + + + F+PLVL ++ G
Sbjct: 427 LRTIFNLLDRFTRKDYTKHAVRLIRDFEVIKKQEKDRTIIFFLPLVLSKMAAARG 481
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 506 ENVTIDNVIEVLNYPDYMHDKQLTTYAVNLFCAHAYYLF 622
E + + +E+L+Y D + D QL T+ + + YY++
Sbjct: 225 ELANLTHSVELLSYGDGLGDMQLATFEIRIRRNPMYYIY 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,718,014
Number of Sequences: 27780
Number of extensions: 296270
Number of successful extensions: 756
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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